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Aliases for SNORD32B Gene

Subcategory (RNA class) for SNORD32B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNORD32B Gene

  • Small Nucleolar RNA, C/D Box 32B 2 3 5
  • U32B 3

External Ids for SNORD32B Gene

Previous GeneCards Identifiers for SNORD32B Gene

  • GC06U900828
  • GC06P029660
  • GC06P029662
  • GC06P029551
  • GC06P029357
  • GC06P029558
  • GC06P029640
  • GC06P029785
  • GC06P029995
  • GC06P030171
  • GC06P029815
  • GC06P030077

Summaries for SNORD32B Gene

GeneCards Summary for SNORD32B Gene

SNORD32B (Small Nucleolar RNA, C/D Box 32B) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD32B Gene

Genomics for SNORD32B Gene

Regulatory Elements for SNORD32B Gene


Genomic Location for SNORD32B Gene

Chromosome:
6
Start:
29,582,249 bp from pter
End:
29,582,332 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for SNORD32B Gene

Genes around SNORD32B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD32B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD32B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for SNORD32B Gene

Post-translational modifications for SNORD32B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD32B Gene

Domains & Families for SNORD32B Gene

Gene Families for SNORD32B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD32B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD32B Gene

Function for SNORD32B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD32B Gene

Localization for SNORD32B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD32B Gene

Pathways & Interactions for SNORD32B Gene

SuperPathways for SNORD32B Gene

No Data Available

Interacting Proteins for SNORD32B Gene

Gene Ontology (GO) - Biological Process for SNORD32B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD32B Gene

Drugs & Compounds for SNORD32B Gene

No Compound Related Data Available

Transcripts for SNORD32B Gene

mRNA/cDNA for SNORD32B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD32B Gene

No ASD Table

Relevant External Links for SNORD32B Gene

GeneLoc Exon Structure for
SNORD32B
ECgene alternative splicing isoforms for
SNORD32B

Expression for SNORD32B Gene

mRNA expression in normal human tissues for SNORD32B Gene

genes like me logo Genes that share expression patterns with SNORD32B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD32B Gene

Orthologs for SNORD32B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD32B Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORD33 36
  • 59 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORD33 36
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD33 36
  • 78 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm26252 36
  • 74 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD33 36
  • 77 (a)
ManyToMany
SNORD33 36
  • 64 (a)
ManyToMany
SNORD33 36
  • 79 (a)
ManyToMany
SNORD33 36
  • 80 (a)
ManyToMany
SNORD33 36
  • 80 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORD33 36
  • 99 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD33 36
  • 34 (a)
ManyToMany
SNORD33 36
  • 50 (a)
ManyToMany
SNORD33 36
  • 42 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 42 (a)
ManyToMany
SNORD33 36
  • 40 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 34 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 40 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 46 (a)
ManyToMany
SNORD33 36
  • 36 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 38 (a)
ManyToMany
SNORD33 36
  • 46 (a)
ManyToMany
SNORD33 36
  • 39 (a)
ManyToMany
SNORD33 36
  • 44 (a)
ManyToMany
SNORD33 36
  • 51 (a)
ManyToMany
SNORD33 36
  • 40 (a)
ManyToMany
SNORD33 36
  • 42 (a)
ManyToMany
SNORD33 36
  • 44 (a)
ManyToMany
SNORD33 36
  • 40 (a)
ManyToMany
SNORD33 36
  • 68 (a)
ManyToMany
SNORD33 36
  • 41 (a)
ManyToMany
SNORD33 36
  • 50 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii SNORD33 36
  • 57 (a)
ManyToMany
SNORD33 36
  • 62 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD33 36
  • 55 (a)
OneToMany
Species with no ortholog for SNORD32B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD32B Gene

ENSEMBL:
Gene Tree for SNORD32B (if available)
TreeFam:
Gene Tree for SNORD32B (if available)

Paralogs for SNORD32B Gene

No data available for Paralogs for SNORD32B Gene

Variants for SNORD32B Gene

Sequence variations from dbSNP and Humsavar for SNORD32B Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1233392 -- 29,582,639(-) AGGGC(C/T)GAGAA downstream-variant-500B
rs1233393 -- 29,581,876(-) GCACT(C/G)GTAAG upstream-variant-2KB
rs1233394 -- 29,581,484(-) GTAGA(G/T)AATGC upstream-variant-2KB
rs6936331 -- 29,580,998(+) ATATA(C/T)GACTT upstream-variant-2KB
rs12530421 -- 29,581,666(+) AAAAA(A/C)CACCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD32B Gene

Variant ID Type Subtype PubMed ID
dgv1908e1 CNV Complex 17122850
essv18215 CNV CNV 17122850
nsv5239 CNV Loss 18451855
esv2504304 CNV Deletion 19546169
dgv376n21 CNV Loss 19592680
esv2302804 CNV Deletion 18987734
nsv519288 CNV Loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for SNORD32B Gene

Disorders for SNORD32B Gene

Relevant External Links for SNORD32B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD32B

No disorders were found for SNORD32B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD32B Gene

Publications for SNORD32B Gene

  1. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M. … Bachellerie J.P. (J. Mol. Biol. 1996) 2 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD32B Gene

Sources for SNORD32B Gene

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