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Aliases for SNORD29 Gene

Subcategory (RNA class) for SNORD29 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD29 Gene

  • Small Nucleolar RNA, C/D Box 29 2 3
  • RNA, U29 Small Nucleolar 2 3
  • RNU29 3
  • U29 3

External Ids for SNORD29 Gene

ORGUL Members for SNORD29 Gene

Previous HGNC Symbols for SNORD29 Gene

  • RNU29

Previous GeneCards Identifiers for SNORD29 Gene

  • GC11M062396
  • GC11M062404
  • GC11M062414
  • GC11M062423
  • GC11M062626
  • GC11M058953
  • GC11M062668

Summaries for SNORD29 Gene

GeneCards Summary for SNORD29 Gene

SNORD29 (Small Nucleolar RNA, C/D Box 29) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD29 Gene

Genomics for SNORD29 Gene

Regulatory Elements for SNORD29 Gene


Promoters for SNORD29 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000040484 -1832 2801 HNRNPUL1 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1

Genomic Location for SNORD29 Gene

Chromosome:
11
Start:
62,853,904 bp from pter
End:
62,853,968 bp from pter
Size:
65 bases
Orientation:
Minus strand

Genomic View for SNORD29 Gene

Genes around SNORD29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD29 Gene

Proteins for SNORD29 Gene

Post-translational modifications for SNORD29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD29 Gene

Domains & Families for SNORD29 Gene

Gene Families for SNORD29 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD29: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD29 Gene

Function for SNORD29 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD29 Gene

Localization for SNORD29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD29 Gene

Pathways & Interactions for SNORD29 Gene

SuperPathways for SNORD29 Gene

No Data Available

Interacting Proteins for SNORD29 Gene

Gene Ontology (GO) - Biological Process for SNORD29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD29 Gene

Drugs & Compounds for SNORD29 Gene

No Compound Related Data Available

Transcripts for SNORD29 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD29 Gene

No ASD Table

Relevant External Links for SNORD29 Gene

GeneLoc Exon Structure for
SNORD29
ECgene alternative splicing isoforms for
SNORD29

No data available for mRNA/cDNA for SNORD29 Gene

Expression for SNORD29 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD29 Gene:

SNORD29
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD29 Gene

Orthologs for SNORD29 Gene

No data available for Orthologs and Evolution for SNORD29 Gene

Paralogs for SNORD29 Gene

No data available for Paralogs for SNORD29 Gene

Variants for SNORD29 Gene

Sequence variations from dbSNP and Humsavar for SNORD29 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000055291 -- 62,855,272(+) TGACA(G/T)TTGTT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1000661059 -- 62,855,896(+) ATCTC(C/T)CCGGG upstream-variant-2KB
rs1000988950 -- 62,855,843(+) AGCTA(C/T)AAAGA intron-variant, upstream-variant-2KB
rs1001419761 -- 62,855,320(+) TCCAC(C/T)AATCC intron-variant, nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB
rs1002424048 -- 62,855,938(+) ACGGG(A/C)TTTGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD29 Gene

Variant ID Type Subtype PubMed ID
nsv1159903 CNV duplication 26073780
nsv508636 CNV deletion 20534489
nsv509416 CNV insertion 20534489

Relevant External Links for SNORD29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD29 Gene

Disorders for SNORD29 Gene

Relevant External Links for SNORD29

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD29

No disorders were found for SNORD29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD29 Gene

Publications for SNORD29 Gene

  1. A mammalian gene with introns instead of exons generating stable RNA products. (PMID: 8559254) Tycowski KT … Steitz JA (Nature 1996) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60
  3. The U22 host gene (UHG): chromosomal localization of UHG and distribution of U22 small nucleolar RNA. (PMID: 9387929) Frey MR … Matera AG (Histochemistry and cell biology 1997) 3 60

Products for SNORD29 Gene

Sources for SNORD29 Gene

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