Free for academic non-profit institutions. Other users need a Commercial license

SNORD24 Gene(RNA Gene)

Small Nucleolar RNA, C/D Box 24

GCID:
GC09P133349
GIFtS:
14
Genes Participants
UDN Logo

Aliases for SNORD24 Gene

Subcategory (RNA class) for SNORD24 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNORD24 Gene

  • Small Nucleolar RNA, C/D Box 24 2 3 5
  • RNA, U24 Small Nucleolar 2 3
  • U24 Small Nucleolar RNA 3
  • U24 SnoRNA 3
  • RNU24 3
  • U24 3

External Ids for SNORD24 Gene

Previous HGNC Symbols for SNORD24 Gene

  • RNU24

Previous GeneCards Identifiers for SNORD24 Gene

  • GC09U900790
  • GC09P135219
  • GC09P135227
  • GC09P135232
  • GC09P135239
  • GC09P136217
  • GC09P136247
  • GC09P136261
  • GC09P136283

Summaries for SNORD24 Gene

GeneCards Summary for SNORD24 Gene

SNORD24 (Small Nucleolar RNA, C/D Box 24) is an RNA Gene, and is affiliated with the non-coding RNA class. Among its related pathways are Viral mRNA Translation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD24 Gene

Genomics for SNORD24 Gene

Products:

  1. Regulatory Element

Regulatory Elements for SNORD24 Gene


Promoters for SNORD24 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SNORD24 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the SNORD24 gene promoter:

Genomic Location for SNORD24 Gene

Chromosome:
9
Start:
133,349,396 bp from pter
End:
133,349,470 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for SNORD24 Gene

Genes around SNORD24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD24 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SNORD24 Gene

Proteins for SNORD24 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SNORD24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD24 Gene

Domains & Families for SNORD24 Gene

Gene Families for SNORD24 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD24: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD24 Gene

Function for SNORD24 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD24 Gene

Localization for SNORD24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD24 Gene

Pathways & Interactions for SNORD24 Gene

SuperPathways for SNORD24 Gene

PathCards logoMore details on SuperPathways for SNORD24
Superpath Contained pathways
1 Viral mRNA Translation
Cytoplasmic Ribosomal Proteins
.66
genes like me logo Genes that share pathways with SNORD24: view

Pathways by source for SNORD24 Gene

1 BioSystems pathway for SNORD24 Gene

Interacting Proteins for SNORD24 Gene

Gene Ontology (GO) - Biological Process for SNORD24 Gene

None

No data available for SIGNOR curated interactions for SNORD24 Gene

Drugs & Compounds for SNORD24 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SNORD24 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for SNORD24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD24 Gene

No ASD Table

Relevant External Links for SNORD24 Gene

GeneLoc Exon Structure for
SNORD24
ECgene alternative splicing isoforms for
SNORD24

Expression for SNORD24 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for SNORD24 Gene

mRNA expression in normal human tissues for SNORD24 Gene
mRNA expression by BioGPS for SNORD24 GenemRNA expression by GTEx for SNORD24 Gene
genes like me logo Genes that share expression patterns with SNORD24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD24 Gene

Orthologs for SNORD24 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD24 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
 Mammalia SNORD24 36
  • 87 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia SNORD24 36
  • 88 (a)
 OneToMany
SNORD24 36
  • 89 (a)
 OneToMany
oppossum
(Monodelphis domestica)
 Mammalia SNORD24 36
  • 83 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Gm23969 36
  • 86 (a)
 OneToOne
platypus
(Ornithorhynchus anatinus)
 Mammalia SNORD24 36
  • 78 (a)
 OneToMany
SNORD24 36
  • 78 (a)
 OneToMany
chimpanzee
(Pan troglodytes)
 Mammalia SNORD24 36
  • 100 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves SNORD24 36
  • 84 (a)
 OneToOne
zebrafish
(Danio rerio)
 Actinopterygii SNORD24 36
  • 81 (a)
 OneToOne
sea squirt
(Ciona savignyi)
 Ascidiacea SNORD24 36
  • 73 (a)
 OneToOne
Species with no ortholog for SNORD24:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD24 Gene

ENSEMBL:
Gene Tree for SNORD24 (if available)
TreeFam:
Gene Tree for SNORD24 (if available)

Paralogs for SNORD24 Gene

No data available for Paralogs for SNORD24 Gene

Variants for SNORD24 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD24 Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV Deletion 23290073
nsv894057 CNV Gain 21882294
dgv8325n71 CNV Loss 21882294
nsv894076 CNV Loss 21882294
nsv894079 CNV Loss 21882294
nsv894080 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SNORD24 Gene

Disorders for SNORD24 Gene

Relevant External Links for SNORD24

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD24

No disorders were found for SNORD24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD24 Gene

Publications for SNORD24 Gene

  1. Human L7a ribosomal protein: sequence, structural organization, and expression of a functional gene. (PMID: 8482538) De Falco S. … Pietropaolo C. (Gene 1993) 2 3 67
  2. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. (PMID: 22268729) Liu B. … Wang L.S. (J. Proteome Res. 2012) 3
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  5. Evolution of U24 and U36 snoRNAs encoded within introns of vertebrate rpL7a gene homologs: unique features of mammalian U36 variants. (PMID: 9703018) Gilley J. … Fried M. (DNA Cell Biol. 1998) 3

Products for SNORD24 Gene

Sources for SNORD24 Gene

Content