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Aliases for SNORD23 Gene

Subcategory (RNA class) for SNORD23 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD23 Gene

  • Small Nucleolar RNA, C/D Box 23 2 3
  • HBII-115 3

External Ids for SNORD23 Gene

ORGUL Members for SNORD23 Gene

Previous GeneCards Identifiers for SNORD23 Gene

  • GC19U900582
  • GC19P052941
  • GC19P048259
  • GC19P044685

Summaries for SNORD23 Gene

GeneCards Summary for SNORD23 Gene

SNORD23 (Small Nucleolar RNA, C/D Box 23) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD23 Gene

Genomics for SNORD23 Gene

Regulatory Elements for SNORD23 Gene

Genomic Location for SNORD23 Gene

Start:
47,755,853 bp from pter
End:
47,755,962 bp from pter
Size:
110 bases
Orientation:
Plus strand

Genomic View for SNORD23 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD23 Gene

Proteins for SNORD23 Gene

Post-translational modifications for SNORD23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD23 Gene

Domains for SNORD23 Gene

Gene Families for SNORD23 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD23: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD23 Gene

Function for SNORD23 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD23 Gene

Localization for SNORD23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD23 Gene

Pathways for SNORD23 Gene

SuperPathways for SNORD23 Gene

No Data Available

Interacting Proteins for SNORD23 Gene

Gene Ontology (GO) - Biological Process for SNORD23 Gene

None

No data available for Pathways by source for SNORD23 Gene

Transcripts for SNORD23 Gene

mRNA/cDNA for SNORD23 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD23 Gene

No ASD Table

Relevant External Links for SNORD23 Gene

GeneLoc Exon Structure for
SNORD23
ECgene alternative splicing isoforms for
SNORD23

Expression for SNORD23 Gene

mRNA expression in normal human tissues for SNORD23 Gene

SOURCE GeneReport for Unigene cluster for SNORD23 Gene Hs.745561

genes like me logo Genes that share expressions with SNORD23: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD23 Gene

Orthologs for SNORD23 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD23 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD23 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD23 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD23 36
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord23 16
Snord23 36
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD23 36
  • 65 (a)
OneToOne
Species with no ortholog for SNORD23:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD23 Gene

ENSEMBL:
Gene Tree for SNORD23 (if available)
TreeFam:
Gene Tree for SNORD23 (if available)

Paralogs for SNORD23 Gene

No data available for Paralogs for SNORD23 Gene

Variants for SNORD23 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD23 Gene

Variant ID Type Subtype PubMed ID
nsv912206 CNV Loss 21882294
dgv3964n71 CNV Loss 21882294
nsv912210 CNV Gain 21882294
nsv912211 CNV Loss 21882294

Relevant External Links for SNORD23 Gene

HapMap Linkage Disequilibrium report
SNORD23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD23 Gene

Disorders for SNORD23 Gene

No disorders were found for SNORD23 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD23 Gene

Publications for SNORD23 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD23 Gene

Sources for SNORD23 Gene

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