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Aliases for SNORD22 Gene

Subcategory (RNA class) for SNORD22 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD22 Gene

  • Small Nucleolar RNA, C/D Box 22 2 3
  • RNA, U22 Small Nucleolar 2 3
  • RNU22 3
  • U22 3

External Ids for SNORD22 Gene

ORGUL Members for SNORD22 Gene

Previous HGNC Symbols for SNORD22 Gene

  • RNU22

Previous GeneCards Identifiers for SNORD22 Gene

  • GC11M062393
  • GC11M062401
  • GC11M062411
  • GC11M062420
  • GC11M062621
  • GC11M058949
  • GC11M062664
  • GC11M062856

Summaries for SNORD22 Gene

GeneCards Summary for SNORD22 Gene

SNORD22 (Small Nucleolar RNA, C/D Box 22) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD22 Gene

Genomics for SNORD22 Gene

Regulatory Elements for SNORD22 Gene

Genomic Location for SNORD22 Gene

Chromosome:
11
Start:
62,852,910 bp from pter
End:
62,853,035 bp from pter
Size:
126 bases
Orientation:
Minus strand

Genomic View for SNORD22 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD22 Gene

Proteins for SNORD22 Gene

Post-translational modifications for SNORD22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD22 Gene

Domains & Families for SNORD22 Gene

Gene Families for SNORD22 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD22: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD22 Gene

Function for SNORD22 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD22 Gene

Localization for SNORD22 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SNORD22 Gene COMPARTMENTS Subcellular localization image for SNORD22 gene
Compartment Confidence
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORD22 Gene

Pathways & Interactions for SNORD22 Gene

SuperPathways for SNORD22 Gene

No Data Available

Interacting Proteins for SNORD22 Gene

Gene Ontology (GO) - Biological Process for SNORD22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD22 Gene

Drugs & Compounds for SNORD22 Gene

No Compound Related Data Available

Transcripts for SNORD22 Gene

mRNA/cDNA for SNORD22 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD22 Gene

No ASD Table

Relevant External Links for SNORD22 Gene

GeneLoc Exon Structure for
SNORD22
ECgene alternative splicing isoforms for
SNORD22

Expression for SNORD22 Gene

mRNA expression in normal human tissues for SNORD22 Gene

SOURCE GeneReport for Unigene cluster for SNORD22 Gene Hs.744737

genes like me logo Genes that share expression patterns with SNORD22: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD22 Gene

Orthologs for SNORD22 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SNORD22 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Snord22 16
Species with no ortholog for SNORD22:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD22 Gene

ENSEMBL:
Gene Tree for SNORD22 (if available)
TreeFam:
Gene Tree for SNORD22 (if available)

Paralogs for SNORD22 Gene

No data available for Paralogs for SNORD22 Gene

Variants for SNORD22 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD22 Gene

Variant ID Type Subtype PubMed ID
nsv483055 CNV Loss 15286789
nsv508636 CNV Loss 20534489
nsv509416 CNV Insertion 20534489

Relevant External Links for SNORD22 Gene

HapMap Linkage Disequilibrium report
SNORD22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD22 Gene

Disorders for SNORD22 Gene

Relevant External Links for SNORD22

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD22
genes like me logo Genes that share disorders with SNORD22: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD22 Gene

Publications for SNORD22 Gene

  1. The U22 host gene (UHG): chromosomal localization of UHG and distribution of U22 small nucleolar RNA. (PMID: 9387929) Frey M.R. … Matera A.G. (Histochem. Cell Biol. 1997) 2 23 67
  2. A mammalian gene with introns instead of exons generating stable RNA products. (PMID: 8559254) Tycowski K.T. … Steitz J.A. (Nature 1996) 2 23 67
  3. Intronic U50 small-nucleolar-RNA (snoRNA) host gene of no protein-coding potential is mapped at the chromosome breakpoint t(3;6)(q27;q15) of human B-cell lymphoma. (PMID: 10792466) Tanaka R. … Mori S. (Genes Cells 2000) 23 67
  4. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 23 67
  5. Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation. (PMID: 7985025) Tycowski K.T. … Steitz J.A. (Science 1994) 23 67

Products for SNORD22 Gene

Sources for SNORD22 Gene

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