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Aliases for SNORD2 Gene

Subcategory (RNA class) for SNORD2 Gene


Quality Score for this RNA gene is


Aliases for SNORD2 Gene

  • Small Nucleolar RNA, C/D Box 2 2 3
  • SnR39B Small Nucleolar RNA 3
  • SnR39B SnoRNA 3
  • SNR39B 3
  • R39B 3

External Ids for SNORD2 Gene

ORGUL Members for SNORD2 Gene

Previous GeneCards Identifiers for SNORD2 Gene

  • GC03P187985
  • GC03P186501
  • GC03P186518
  • GC03P186542
  • GC03P186569

Summaries for SNORD2 Gene

GeneCards Summary for SNORD2 Gene

SNORD2 (Small Nucleolar RNA, C/D Box 2) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Translation Factors.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD2 Gene

Genomics for SNORD2 Gene

Regulatory Elements for SNORD2 Gene

Genomic Location for SNORD2 Gene

186,784,796 bp from pter
186,784,865 bp from pter
70 bases
Plus strand

Genomic View for SNORD2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD2 Gene

Proteins for SNORD2 Gene

Post-translational modifications for SNORD2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD2 Gene

Domains for SNORD2 Gene

Gene Families for SNORD2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD2 Gene

Function for SNORD2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD2 Gene

Localization for SNORD2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD2 Gene

Pathways for SNORD2 Gene

SuperPathways for SNORD2 Gene

Superpath Contained pathways
1 Translation Factors
genes like me logo Genes that share pathways with SNORD2: view

Pathways by source for SNORD2 Gene

1 BioSystems pathway for SNORD2 Gene

Interacting Proteins for SNORD2 Gene

Gene Ontology (GO) - Biological Process for SNORD2 Gene


Transcripts for SNORD2 Gene

mRNA/cDNA for SNORD2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD2 Gene

No ASD Table

Relevant External Links for SNORD2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD2 Gene

mRNA expression in normal human tissues for SNORD2 Gene

genes like me logo Genes that share expressions with SNORD2: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORD2 Gene

Orthologs for SNORD2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD2 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Snord2 16
Snord2 36
  • 99 (a)
(Bos Taurus)
Mammalia SNORD2 36
  • 100 (a)
(Canis familiaris)
Mammalia SNORD2 36
  • 100 (a)
(Monodelphis domestica)
Mammalia SNORD2 36
  • 81 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD2 36
  • 68 (a)
(Pan troglodytes)
Mammalia SNORD2 36
  • 100 (a)
(Gallus gallus)
Aves SNORD2 36
  • 80 (a)
(Anolis carolinensis)
Reptilia SNORD2 36
  • 81 (a)
(Danio rerio)
Actinopterygii SNORD2 36
  • 62 (a)
  • 75 (a)
  • 68 (a)
Species with no ortholog for SNORD2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD2 Gene

Gene Tree for SNORD2 (if available)
Gene Tree for SNORD2 (if available)

Paralogs for SNORD2 Gene

No data available for Paralogs for SNORD2 Gene

Variants for SNORD2 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD2 Gene

Variant ID Type Subtype PubMed ID
dgv1541e1 CNV Complex 17122850
esv34136 CNV Loss 18971310

Relevant External Links for SNORD2 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD2 Gene

Disorders for SNORD2 Gene

No disorders were found for SNORD2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORD2 Gene

Publications for SNORD2 Gene

  1. Identification of a novel box C/D snoRNA from mouse nucleolar cDNA library. (PMID: 14960365) Zhou H. … Qu L.H. (Gene 2004) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. A meta-analysis of genome-wide association studies for adiponectin levels in East Asians identifies a novel locus near WDR11-FGFR2. (PMID: 24105470) Wu Y. … Tai E.S. (Hum. Mol. Genet. 2014) 3

Products for SNORD2 Gene

Sources for SNORD2 Gene

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