Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORD1C Gene

Subcategory (RNA class) for SNORD1C Gene


Quality Score for this RNA gene is


Aliases for SNORD1C Gene

  • Small Nucleolar RNA, C/D Box 1C 2 3
  • R38c SnoRNA 3
  • SnR38C 3
  • R38C 3

External Ids for SNORD1C Gene

ORGUL Members for SNORD1C Gene

Previous GeneCards Identifiers for SNORD1C Gene

  • GC17U900726
  • GC17P072079
  • GC17P074553
  • GC17P069982
  • GC17P074560

Summaries for SNORD1C Gene

GeneCards Summary for SNORD1C Gene

SNORD1C (Small Nucleolar RNA, C/D Box 1C) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD1C include multiple myeloma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD1C Gene

Genomics for SNORD1C Gene

Regulatory Elements for SNORD1C Gene

Genomic Location for SNORD1C Gene

76,558,791 bp from pter
76,558,869 bp from pter
79 bases
Plus strand

Genomic View for SNORD1C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD1C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD1C Gene

Proteins for SNORD1C Gene

Post-translational modifications for SNORD1C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD1C Gene

Domains for SNORD1C Gene

Gene Families for SNORD1C Gene

  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD1C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD1C Gene

Function for SNORD1C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD1C Gene

Localization for SNORD1C Gene

Subcellular locations from

Jensen Localization Image for SNORD1C Gene COMPARTMENTS Subcellular localization image for SNORD1C gene
Compartment Confidence
extracellular 3
cytosol 1
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORD1C Gene

Pathways for SNORD1C Gene

SuperPathways for SNORD1C Gene

No Data Available

Interacting Proteins for SNORD1C Gene

Gene Ontology (GO) - Biological Process for SNORD1C Gene


No data available for Pathways by source for SNORD1C Gene

Transcripts for SNORD1C Gene

mRNA/cDNA for SNORD1C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD1C Gene

No ASD Table

Relevant External Links for SNORD1C Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD1C Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for SNORD1C Gene

Orthologs for SNORD1C Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SNORD1C Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Snord1c 16
Species with no ortholog for SNORD1C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD1C Gene

Gene Tree for SNORD1C (if available)
Gene Tree for SNORD1C (if available)

Paralogs for SNORD1C Gene

No data available for Paralogs for SNORD1C Gene

Variants for SNORD1C Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD1C Gene

Variant ID Type Subtype PubMed ID
nsv908831 CNV Loss 21882294
nsv828107 CNV Loss 20364138

Relevant External Links for SNORD1C Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD1C Gene

Disorders for SNORD1C Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for SNORD1C Gene in MalaCards »

(1) Diseases for SNORD1C Gene including...

genes like me logo Genes that share disorders with SNORD1C: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SNORD1C Gene

Publications for SNORD1C Gene

  1. Identification of a novel box C/D snoRNA from mouse nucleolar cDNA library. (PMID: 14960365) Zhou H. … Qu L.H. (Gene 2004) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3

Products for SNORD1C Gene

Sources for SNORD1C Gene

Back to Top