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Aliases for SNORD1B Gene

Subcategory (RNA class) for SNORD1B Gene


Quality Score for this RNA gene is


Aliases for SNORD1B Gene

  • Small Nucleolar RNA, C/D Box 1B 2 3 5
  • R38b SnoRNA 3
  • SnR38B 3
  • R38B 3

External Ids for SNORD1B Gene

ORGUL Members for SNORD1B Gene

Previous GeneCards Identifiers for SNORD1B Gene

  • GC17U900725
  • GC17P072077
  • GC17P074558
  • GC17P069984
  • GC17P074561
  • GC17P074576
  • GC17P074590
  • GC17P074602

Summaries for SNORD1B Gene

GeneCards Summary for SNORD1B Gene

SNORD1B (Small Nucleolar RNA, C/D Box 1B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD1B Gene

Genomics for SNORD1B Gene

Regulatory Elements for SNORD1B Gene

Promoters for SNORD1B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SNORD1B on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD1B Gene

76,561,108 bp from pter
76,561,193 bp from pter
86 bases
Plus strand

Genomic View for SNORD1B Gene

Genes around SNORD1B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD1B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD1B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD1B Gene

Proteins for SNORD1B Gene

Post-translational modifications for SNORD1B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD1B Gene

Domains & Families for SNORD1B Gene

Gene Families for SNORD1B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD1B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD1B Gene

Function for SNORD1B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD1B Gene

Localization for SNORD1B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD1B Gene

Pathways & Interactions for SNORD1B Gene

SuperPathways for SNORD1B Gene

No Data Available

Interacting Proteins for SNORD1B Gene

Gene Ontology (GO) - Biological Process for SNORD1B Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD1B Gene

Drugs & Compounds for SNORD1B Gene

No Compound Related Data Available

Transcripts for SNORD1B Gene

mRNA/cDNA for SNORD1B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD1B Gene

No ASD Table

Relevant External Links for SNORD1B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD1B Gene

mRNA expression in normal human tissues for SNORD1B Gene

genes like me logo Genes that share expression patterns with SNORD1B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD1B Gene

Orthologs for SNORD1B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD1B Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia snoR38 36
  • 86 (a)
(Canis familiaris)
Mammalia snoR38 36
  • 68 (a)
snoR38 36
  • 85 (a)
(Monodelphis domestica)
Mammalia snoR38 36
  • 64 (a)
(Mus musculus)
Mammalia Snord1a 36
  • 61 (a)
(Ornithorhynchus anatinus)
Mammalia snoR38 36
  • 64 (a)
(Pan troglodytes)
Mammalia snoR38 36
  • 100 (a)
(Anolis carolinensis)
Reptilia snoR38 36
  • 62 (a)
snoR38 36
  • 65 (a)
(Danio rerio)
Actinopterygii snoR38 36
  • 59 (a)
Species with no ortholog for SNORD1B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD1B Gene

Gene Tree for SNORD1B (if available)
Gene Tree for SNORD1B (if available)

Paralogs for SNORD1B Gene

No data available for Paralogs for SNORD1B Gene

Variants for SNORD1B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD1B Gene

Variant ID Type Subtype PubMed ID
nsv908831 CNV Loss 21882294
nsv828107 CNV Loss 20364138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SNORD1B Gene

Disorders for SNORD1B Gene

Relevant External Links for SNORD1B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD1B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD1B Gene

Publications for SNORD1B Gene

  1. Identification of a novel box C/D snoRNA from mouse nucleolar cDNA library. (PMID: 14960365) Zhou H. … Qu L.H. (Gene 2004) 2 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD1B Gene

Sources for SNORD1B Gene