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Aliases for SNORD19B Gene

Subcategory (RNA class) for SNORD19B Gene


Quality Score for this RNA gene is


Aliases for SNORD19B Gene

  • Small Nucleolar RNA, C/D Box 19B 2 3 5

External Ids for SNORD19B Gene

ORGUL Members for SNORD19B Gene

Previous GeneCards Identifiers for SNORD19B Gene

  • GC03U900868
  • GC03P052704
  • GC03P052705
  • GC03P052706
  • GC03P052717
  • GC03P052727
  • GC03P052728
  • GC03P052729
  • GC03P052730
  • GC03P052707
  • GC03P052712
  • GC03P052731
  • GC03P052740
  • GC03P052746
  • GC03P052751

Summaries for SNORD19B Gene

GeneCards Summary for SNORD19B Gene

SNORD19B (Small Nucleolar RNA, C/D Box 19B) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD19B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD19B Gene

Genomics for SNORD19B Gene

Regulatory Elements for SNORD19B Gene

Enhancers for SNORD19B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H052890 1.5 FANTOM5 Ensembl ENCODE 9.6 +201.9 201887 4 HDGF ATF1 FOXA2 MLX ARID4B DMAP1 YY1 ZNF207 FOS ATF7 ITIH4 ENSG00000243696 ITIH4-AS1 PBRM1 MUSTN1 SNORD69 ENSG00000222345 ENSG00000252787 SNORD19 SNORD19B
GH03H052719 1.1 Ensembl ENCODE dbSUPER 11.4 +30.7 30710 3 ZNF680 MAX REST GABPA POLR2A EED TRIM24 RUNX3 MYC ZNF558 PBRM1 GNL3 SNORD69 ENSG00000222345 ENSG00000252787 SNORD19 SNORD19B ITIH1 STAB1 SFMBT1
GH03H052466 1.1 VISTA FANTOM5 dbSUPER 10.8 -222.6 -222558 3 ZNF121 POLR2A MNT PRDM1 NR2F2 NT5DC2 SEMA3G STAB1 SMIM4 RNU6-856P RNU6ATAC16P PBRM1 GNL3 ENSG00000222345 ENSG00000252787
GH03H052769 1.1 ENCODE 10.4 +80.2 80150 2 HDGF FOXA2 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 ZNF143 SP3 PBRM1 RFT1 ITIH3 RRP9 ITIH4-AS1 ENSG00000243696 ITIH4 SNORD69 GNL3 MUSTN1
GH03H053043 1 ENCODE 10.1 +354.6 354552 3 FOXA2 ARNT SIN3A ZNF766 GLIS2 ELK1 ZNF143 ZNF207 ATF7 SMARCA4 ITIH4 RFT1 PBRM1 SFMBT1 TMEM110 SNORD19B PRKCD ITIH3 GC03P053048 LOC105377135
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD19B on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD19B Gene

52,690,738 bp from pter
52,690,830 bp from pter
93 bases
Plus strand

Genomic View for SNORD19B Gene

Genes around SNORD19B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD19B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD19B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD19B Gene

Proteins for SNORD19B Gene

Post-translational modifications for SNORD19B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD19B Gene

Domains & Families for SNORD19B Gene

Gene Families for SNORD19B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD19B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD19B Gene

Function for SNORD19B Gene

Phenotypes From GWAS Catalog for SNORD19B Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD19B
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD19B Gene

Localization for SNORD19B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD19B Gene

Pathways & Interactions for SNORD19B Gene

SuperPathways for SNORD19B Gene

No Data Available

Interacting Proteins for SNORD19B Gene

Gene Ontology (GO) - Biological Process for SNORD19B Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD19B Gene

Drugs & Compounds for SNORD19B Gene

No Compound Related Data Available

Transcripts for SNORD19B Gene

mRNA/cDNA for SNORD19B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD19B
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD19B Gene

No ASD Table

Relevant External Links for SNORD19B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD19B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD19B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD19B Gene:

genes like me logo Genes that share expression patterns with SNORD19B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD19B Gene

Orthologs for SNORD19B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD19B Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD19B 34
  • 99 (a)
(Bos Taurus)
Mammalia SNORD19B 34
  • 87 (a)
(Canis familiaris)
Mammalia SNORD19B 34
  • 85 (a)
(Monodelphis domestica)
Mammalia SNORD19B 34
  • 83 (a)
(Mus musculus)
Mammalia Gm24916 34
  • 77 (a)
Gm23852 34
  • 75 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD19B 34
  • 70 (a)
(Gallus gallus)
Aves SNORD19B 34
  • 58 (a)
Species where no ortholog for SNORD19B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD19B Gene

Gene Tree for SNORD19B (if available)
Gene Tree for SNORD19B (if available)

Paralogs for SNORD19B Gene

No data available for Paralogs for SNORD19B Gene

Variants for SNORD19B Gene

Sequence variations from dbSNP and Humsavar for SNORD19B Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000590781 -- 52,690,344(+) TGCAA(A/G)CTCCA intron-variant, upstream-variant-2KB
rs1001766671 -- 52,689,929(+) CCTGG(A/G)CAACA intron-variant, upstream-variant-2KB
rs1005763772 -- 52,690,259(+) CAAAT(A/G)TCTTT intron-variant, upstream-variant-2KB
rs1008288805 -- 52,689,601(+) TATGC(A/G)TCTGA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1010366621 -- 52,689,966(+) AATTG(A/G)CTGCT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD19B Gene

Variant ID Type Subtype PubMed ID
esv3596161 CNV loss 21293372

Relevant External Links for SNORD19B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD19B Gene

Disorders for SNORD19B Gene

Relevant External Links for SNORD19B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD19B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD19B Gene

Publications for SNORD19B Gene

  1. Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (PMID: 21926972) Psychiatric GWAS Consortium Bipolar Disorder Working Group (Nature genetics 2011) 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60
  3. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang JH … Qu LH (Nucleic acids research 2006) 3 60

Products for SNORD19B Gene

Sources for SNORD19B Gene

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