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Aliases for SNORD19 Gene

Subcategory (RNA class) for SNORD19 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD19 Gene

  • Small Nucleolar RNA, C/D Box 19 2 3 5
  • HBII-108 3

External Ids for SNORD19 Gene

ORGUL Members for SNORD19 Gene

Previous GeneCards Identifiers for SNORD19 Gene

  • GC03U900638
  • GC03P052698
  • GC03P052723
  • GC03P052693
  • GC03P052710

Summaries for SNORD19 Gene

GeneCards Summary for SNORD19 Gene

SNORD19 (Small Nucleolar RNA, C/D Box 19) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD19 Gene

Genomics for SNORD19 Gene

Regulatory Elements for SNORD19 Gene

Genomic Location for SNORD19 Gene

Chromosome:
3
Start:
52,689,240 bp from pter
End:
52,689,315 bp from pter
Size:
76 bases
Orientation:
Plus strand

Genomic View for SNORD19 Gene

Genes around SNORD19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD19 Gene

Proteins for SNORD19 Gene

Post-translational modifications for SNORD19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD19 Gene

Domains & Families for SNORD19 Gene

Gene Families for SNORD19 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD19: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD19 Gene

Function for SNORD19 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD19 Gene

Localization for SNORD19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD19 Gene

Pathways & Interactions for SNORD19 Gene

SuperPathways for SNORD19 Gene

No Data Available

Interacting Proteins for SNORD19 Gene

Gene Ontology (GO) - Biological Process for SNORD19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD19 Gene

Drugs & Compounds for SNORD19 Gene

No Compound Related Data Available

Transcripts for SNORD19 Gene

mRNA/cDNA for SNORD19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD19 Gene

No ASD Table

Relevant External Links for SNORD19 Gene

GeneLoc Exon Structure for
SNORD19
ECgene alternative splicing isoforms for
SNORD19

Expression for SNORD19 Gene

mRNA expression in normal human tissues for SNORD19 Gene

genes like me logo Genes that share expression patterns with SNORD19: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD19 Gene

Orthologs for SNORD19 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD19 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD19 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD19 36
  • 68 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD19 36
  • 77 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord19 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD19 36
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD19 36
  • 70 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD19 36
  • 62 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD19 36
  • 66 (a)
OneToOne
Species with no ortholog for SNORD19:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD19 Gene

ENSEMBL:
Gene Tree for SNORD19 (if available)
TreeFam:
Gene Tree for SNORD19 (if available)

Paralogs for SNORD19 Gene

No data available for Paralogs for SNORD19 Gene

Variants for SNORD19 Gene

Relevant External Links for SNORD19 Gene

HapMap Linkage Disequilibrium report
SNORD19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD19 Gene

Disorders for SNORD19 Gene

Relevant External Links for SNORD19

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD19

No disorders were found for SNORD19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD19 Gene

Publications for SNORD19 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3 67
  2. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3
  3. Identification of new susceptibility loci for osteoarthritis (arcOGEN): a genome-wide association study. (PMID: 22763110) . … Loughlin J. (Lancet 2012) 3
  4. Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (PMID: 21926972) (Nat. Genet. 2011) 3
  5. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD19 Gene

Sources for SNORD19 Gene

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