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Aliases for SNORD15B Gene

Subcategory (RNA class) for SNORD15B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD15B Gene

  • Small Nucleolar RNA, C/D Box 15B 2 3
  • RNA, U15b Small Nucleolar 2 3
  • U15B Small Nucleolar RNA 3
  • U15B SnoRNA 3
  • U15B SnRNA 3
  • RNU15B 3
  • U15B 3

External Ids for SNORD15B Gene

ORGUL Members for SNORD15B Gene

Previous Symbols for SNORD15B Gene

  • RNU15B

Summaries for SNORD15B Gene

GeneCards Summary for SNORD15B Gene

SNORD15B (Small Nucleolar RNA, C/D Box 15B) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD15B Gene

Genomics for SNORD15B Gene

Genomic Location for SNORD15B Gene

Start:
75,404,421 bp from pter
End:
75,404,566 bp from pter
Size:
146 bases
Orientation:
Plus strand

Genomic View for SNORD15B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD15B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD15B Gene

Regulatory Elements for SNORD15B Gene

Proteins for SNORD15B Gene

Post-translational modifications for SNORD15B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD15B Gene

Domains for SNORD15B Gene

Gene Families for SNORD15B Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORD15B: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORD15B Gene

Function for SNORD15B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD15B Gene

Localization for SNORD15B Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORD15B Gene

Pathways for SNORD15B Gene

SuperPathways for SNORD15B Gene

No Data Available

Interacting Proteins for SNORD15B Gene

Gene Ontology (GO) - Biological Process for SNORD15B Gene

None

No data available for Pathways by source for SNORD15B Gene

Transcripts for SNORD15B Gene

mRNA/cDNA for SNORD15B Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD15B Gene

No ASD Table

Relevant External Links for SNORD15B Gene

GeneLoc Exon Structure for
SNORD15B
ECgene alternative splicing isoforms for
SNORD15B

Expression for SNORD15B Gene

mRNA expression in normal human tissues for SNORD15B Gene

SOURCE GeneReport for Unigene cluster for SNORD15B Gene Hs.689080

genes like me logo Genes that share expressions with SNORD15B: view

Orthologs for SNORD15B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD15B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD15 37
  • 94 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD15 37
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD15 37
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord15b 16
Snord15b 37
  • 90 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD15 37
  • 77 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD15 37
  • 63 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD15 37
  • 71 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD15 37
  • 63 (a)
ManyToMany
SNORD15 37
  • 60 (a)
ManyToMany
SNORD15 37
  • 60 (a)
ManyToMany
SNORD15 37
  • 60 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD15 37
  • 70 (a)
ManyToMany
SNORD15 37
  • 70 (a)
ManyToMany
SNORD15 37
  • 70 (a)
ManyToMany
SNORD15 37
  • 67 (a)
ManyToMany
Species with no ortholog for SNORD15B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD15B Gene

ENSEMBL:
Gene Tree for SNORD15B (if available)
TreeFam:
Gene Tree for SNORD15B (if available)

Paralogs for SNORD15B Gene

No data available for Paralogs for SNORD15B Gene

Variants for SNORD15B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD15B Gene

Variant ID Type Subtype PubMed ID
nsv897920 CNV Loss 21882294

Relevant External Links for SNORD15B Gene

HapMap Linkage Disequilibrium report
SNORD15B

No data available for Sequence variations from dbSNP and Humsavar for SNORD15B Gene

Disorders for SNORD15B Gene

No disorders were found for SNORD15B Gene.

No data available for UniProtKB/Swiss-Prot for SNORD15B Gene

Publications for SNORD15B Gene

  1. Mapping of ribosomal protein S3 and internally nested snoRNA U15A gene to human chromosome 11q13.3-q13.5. (PMID: 7789996) Polakiewicz R.D. … Page D.C. (Genomics 1995) 2 3
  2. A small nucleolar RNA is processed from an intron of the human gene encoding ribosomal protein S3. (PMID: 8319909) Tycowski K.T. … Steitz J.A. (Genes Dev. 1993) 2 3
  3. Complete genomic structure of human rpS3: identification of functional U15b snoRNA in the fifth intron. (PMID: 11943484) Lim Y. … Kim J. (Gene 2002) 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD15B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORD15B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD15B
    • Block miRNA regulation of SNORD15B using miScript Target Protectors

    Sources for SNORD15B Gene

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