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Aliases for SNORD15B Gene

Subcategory (RNA class) for SNORD15B Gene


Quality Score for this RNA gene is


Aliases for SNORD15B Gene

  • Small Nucleolar RNA, C/D Box 15B 2 3 5
  • RNA, U15b Small Nucleolar 2 3
  • U15B Small Nucleolar RNA 3
  • U15B SnoRNA 3
  • U15B SnRNA 3
  • RNU15B 3
  • U15B 3

External Ids for SNORD15B Gene

ORGUL Members for SNORD15B Gene

Previous HGNC Symbols for SNORD15B Gene

  • RNU15B

Previous GeneCards Identifiers for SNORD15B Gene

  • GC11P074796
  • GC11P075115
  • GC11P071412

Summaries for SNORD15B Gene

GeneCards Summary for SNORD15B Gene

SNORD15B (Small Nucleolar RNA, C/D Box 15B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD15B Gene

Genomics for SNORD15B Gene

Regulatory Elements for SNORD15B Gene

Enhancers for SNORD15B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F075445 0.8 ENCODE 11.9 +41.1 41070 0.2 HDGF KLF17 ARID4B DMAP1 RAD21 YY1 ZNF121 ZNF366 ZNF143 THAP11 GDPD5 SNORD15B SERPINH1 GC11M075443 PIR48197 ENSG00000254460
GH11F074416 0.9 Ensembl ENCODE 11.8 -986.1 -986104 2.8 PKNOX1 SIN3A FEZF1 ZNF2 ZNF121 FOS MIER2 TSHZ1 REST ZNF518A POLD3 ENSG00000206913 RNF169 SNORD15B RPS12P22 RN7SL239P ENSG00000254631 KCNE3 ENSG00000255440 ENSG00000254928
GH11F075767 0.2 ENCODE 11.8 +364.4 364445 1.9 HDGF PKNOX1 ARNT MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 SLC30A9 SERPINH1 SNORD15B LRRC32 MOGAT2 ENSG00000255363 RN7SL239P LOC283214 ENSG00000254826
GH11F074707 0.4 ENCODE 11.8 -696.4 -696369 1.3 PKNOX1 INSM2 KLF17 FEZF1 ZEB1 ZNF335 ZNF366 ZNF391 FOS EGR2 XRRA1 POLD3 ENSG00000206913 RNF169 SNORD15B RPS12P22 CHRDL2 RANP3 RN7SL239P ENSG00000279353
GH11F075461 0.8 Ensembl ENCODE 11.4 +58.5 58493 2.6 BCOR HDAC1 USF1 ESRRA TEAD4 ZMYM3 ZNF664 ZNF316 POLR2A MAFK GDPD5 KLHL35 SNORD15B LOC105369391 SERPINH1 MIR326 MOGAT2 PIR48197 GC11M075443 ENSG00000254460
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORD15B on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD15B Gene

75,404,421 bp from pter
75,404,566 bp from pter
146 bases
Plus strand

Genomic View for SNORD15B Gene

Genes around SNORD15B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD15B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD15B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD15B Gene

Proteins for SNORD15B Gene

Post-translational modifications for SNORD15B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD15B Gene

Domains & Families for SNORD15B Gene

Gene Families for SNORD15B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD15B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD15B Gene

Function for SNORD15B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD15B Gene

Localization for SNORD15B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD15B Gene

Pathways & Interactions for SNORD15B Gene

SuperPathways for SNORD15B Gene

No Data Available

Interacting Proteins for SNORD15B Gene

Gene Ontology (GO) - Biological Process for SNORD15B Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD15B Gene

Transcripts for SNORD15B Gene

mRNA/cDNA for SNORD15B Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD15B Gene

No ASD Table

Relevant External Links for SNORD15B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD15B Gene

mRNA expression in normal human tissues for SNORD15B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD15B Gene:


SOURCE GeneReport for Unigene cluster for SNORD15B Gene:

genes like me logo Genes that share expression patterns with SNORD15B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD15B Gene

Orthologs for SNORD15B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD15B Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia SNORD15 35
  • 94 (a)
(Pan troglodytes)
Mammalia SNORD15 35
  • 94 (a)
(Mus musculus)
Mammalia Snord15b 35
  • 90 (a)
(Bos Taurus)
Mammalia SNORD15 35
  • 88 (a)
(Monodelphis domestica)
Mammalia SNORD15 35
  • 77 (a)
(Gallus gallus)
Aves SNORD15 35
  • 63 (a)
(Anolis carolinensis)
Reptilia SNORD15 35
  • 71 (a)
(Danio rerio)
Actinopterygii SNORD15 35 35 35 35
  • 63 (a)
sea squirt
(Ciona savignyi)
Ascidiacea SNORD15 35 35 35 35
  • 70 (a)
Species where no ortholog for SNORD15B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD15B Gene

Gene Tree for SNORD15B (if available)
Gene Tree for SNORD15B (if available)

Paralogs for SNORD15B Gene

No data available for Paralogs for SNORD15B Gene

Variants for SNORD15B Gene

Sequence variations from dbSNP and Humsavar for SNORD15B Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs10501422 -- 75,402,894(+) CAAAT(C/G)TGCTT intron-variant, upstream-variant-2KB
rs112237018 -- 75,403,179(+) AAAGA(C/T)GGCTT intron-variant, upstream-variant-2KB
rs112257958 -- 75,404,666(+) GTGTC(C/G)TCTAG intron-variant, downstream-variant-500B
rs112394738 -- 75,403,480(+) CTGCC(A/G)AATGA intron-variant, upstream-variant-2KB
rs112442134 -- 75,403,998(+) CAGTG(A/G)CTCTC intron-variant, upstream-variant-2KB

Relevant External Links for SNORD15B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD15B Gene

Disorders for SNORD15B Gene

Relevant External Links for SNORD15B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD15B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD15B Gene

Publications for SNORD15B Gene

  1. Mapping of ribosomal protein S3 and internally nested snoRNA U15A gene to human chromosome 11q13.3-q13.5. (PMID: 7789996) Polakiewicz R.D. … Page D.C. (Genomics 1995) 2 3 64
  2. A small nucleolar RNA is processed from an intron of the human gene encoding ribosomal protein S3. (PMID: 8319909) Tycowski K.T. … Steitz J.A. (Genes Dev. 1993) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64
  4. Complete genomic structure of human rpS3: identification of functional U15b snoRNA in the fifth intron. (PMID: 11943484) Lim Y. … Kim J. (Gene 2002) 3 64

Products for SNORD15B Gene

Sources for SNORD15B Gene

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