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Aliases for SNORD14E Gene

Subcategory (RNA class) for SNORD14E Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD14E Gene

  • Small Nucleolar RNA, C/D Box 14E 2 3 5
  • RNA, Small Nucleolar 3
  • SnoRNA 3

External Ids for SNORD14E Gene

ORGUL Members for SNORD14E Gene

Previous GeneCards Identifiers for SNORD14E Gene

  • GC11M122469
  • GC11M122931
  • GC11M122935
  • GC11M118871
  • GC11M122939
  • GC11M122944
  • GC11M122955
  • GC11M122965
  • GC11M122978

Summaries for SNORD14E Gene

GeneCards Summary for SNORD14E Gene

SNORD14E (Small Nucleolar RNA, C/D Box 14E) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD14E Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD14E Gene

Genomics for SNORD14E Gene

GeneHancer (GH) Regulatory Elements for SNORD14E Gene

Promoters and enhancers for SNORD14E Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I123055 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.8 -3.0 -2951 10.9 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 GC11M123091 GC11M123095 HSPA8 LOC101929289 PIR56485 PIR53037 SNORD14C ZNF202 CLMP GC11M123093
GH11I123054 Enhancer 0.8 ENCODE dbSUPER 0.8 +3.1 3083 0.9 CTCF ATF2 JUND ZNF366 POLR2A ZSCAN5C NFATC1 BCLAF1 GC11M123094 GC11P123052 SNORD14E
GH11I123056 Enhancer 0.8 ENCODE dbSUPER 0.8 +3.7 3683 0.2 CTCF ZNF654 ATF2 RAD21 RFX5 JUND ZNF366 POLR2A NFATC1 ZNF143 GC11M123094 GC11P123052 SNORD14E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD14E on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD14E Gene

Genomic Locations for SNORD14E Gene
chr11:123,058,077-123,058,161
(GRCh38/hg38)
Size:
85 bases
Orientation:
Minus strand
chr11:122,928,785-122,928,869
(GRCh37/hg19)

Genomic View for SNORD14E Gene

Genes around SNORD14E on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD14E Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD14E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD14E Gene

Proteins for SNORD14E Gene

Post-translational modifications for SNORD14E Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD14E Gene

Domains & Families for SNORD14E Gene

Gene Families for SNORD14E Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD14E: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD14E Gene

Function for SNORD14E Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD14E Gene

Localization for SNORD14E Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD14E Gene

Pathways & Interactions for SNORD14E Gene

SuperPathways for SNORD14E Gene

No Data Available

Interacting Proteins for SNORD14E Gene

Gene Ontology (GO) - Biological Process for SNORD14E Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD14E Gene

Drugs & Compounds for SNORD14E Gene

No Compound Related Data Available

Transcripts for SNORD14E Gene

mRNA/cDNA for SNORD14E Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD14E Gene

No ASD Table

Relevant External Links for SNORD14E Gene

GeneLoc Exon Structure for
SNORD14E
ECgene alternative splicing isoforms for
SNORD14E

Expression for SNORD14E Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD14E Gene

mRNA differential expression in normal tissues according to GTEx for SNORD14E Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of SNORD14E Gene:

SNORD14E
genes like me logo Genes that share expression patterns with SNORD14E: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD14E Gene

Orthologs for SNORD14E Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD14E Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD14 34 34
  • 95 (a)
OneToMany
cow
(Bos Taurus)
Mammalia SNORD14 34
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD14 34
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord14e 34
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD14 34
  • 74 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD14 34
  • 72 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD14 34
  • 69 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD14 34
  • 71 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD14 34 34
  • 66 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD14 34
  • 41 (a)
OneToMany
Species where no ortholog for SNORD14E was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD14E Gene

ENSEMBL:
Gene Tree for SNORD14E (if available)
TreeFam:
Gene Tree for SNORD14E (if available)

Paralogs for SNORD14E Gene

No data available for Paralogs for SNORD14E Gene

Variants for SNORD14E Gene

Sequence variations from dbSNP and Humsavar for SNORD14E Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000333769 -- 123,059,644(-) C/T upstream_transcript_variant
rs1001112689 -- 123,058,554(-) G/C upstream_transcript_variant
rs1003257093 -- 123,059,809(-) G/A upstream_transcript_variant
rs1005343071 -- 123,057,659(-) C/A downstream_transcript_variant
rs1009339759 -- 123,058,197(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD14E Gene

Variant ID Type Subtype PubMed ID
nsv1039284 CNV gain 25217958
nsv983069 CNV duplication 23825009

Additional Variant Information for SNORD14E Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD14E

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD14E Gene

Disorders for SNORD14E Gene

Additional Disease Information for SNORD14E

No disorders were found for SNORD14E Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD14E Gene

Publications for SNORD14E Gene

  1. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. (PMID: 2251119) Liu J … Maxwell ES (Nucleic acids research 1990) 2 3 58
  2. Structure and expression of a human gene coding for a 71 kd heat shock 'cognate' protein. (PMID: 3037489) Dworniczak B … Mirault ME (Nucleic acids research 1987) 2 3 58
  3. Phylogenetic analysis of the stress-70 protein family. (PMID: 7545947) Rensing SA … Maier UG (Journal of molecular evolution 1994) 3 58
  4. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for SNORD14E Gene

Sources for SNORD14E Gene

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