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Aliases for SNORD14C Gene

Subcategory (RNA class) for SNORD14C Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD14C Gene

  • Small Nucleolar RNA, C/D Box 14C 2 3 5
  • RNA, Small Nucleolar 3
  • SnoRNA 3

External Ids for SNORD14C Gene

ORGUL Members for SNORD14C Gene

Previous GeneCards Identifiers for SNORD14C Gene

  • GC11M122472
  • GC11M122933
  • GC11M122937
  • GC11M118874
  • GC11M122941
  • GC11M122946
  • GC11M122957
  • GC11M122967
  • GC11M122980
  • GC11M123060
  • GC11M123064
  • GC11M123066
  • GC11M123073
  • GC11M123077

Summaries for SNORD14C Gene

GeneCards Summary for SNORD14C Gene

SNORD14C (Small Nucleolar RNA, C/D Box 14C) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD14C Gene

Genomics for SNORD14C Gene

Genomic Location for SNORD14C Gene

Chromosome:
11
Start:
123,059,335 bp from pter
End:
123,059,422 bp from pter
Size:
88 bases
Orientation:
Minus strand

Genomic View for SNORD14C Gene

Genes around SNORD14C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD14C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD14C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD14C Gene

No data available for Regulatory Elements for SNORD14C Gene

Proteins for SNORD14C Gene

Post-translational modifications for SNORD14C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD14C Gene

Domains & Families for SNORD14C Gene

Gene Families for SNORD14C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD14C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD14C Gene

Function for SNORD14C Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD14C Gene

Localization for SNORD14C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD14C Gene

Pathways & Interactions for SNORD14C Gene

SuperPathways for SNORD14C Gene

No Data Available

Interacting Proteins for SNORD14C Gene

Gene Ontology (GO) - Biological Process for SNORD14C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD14C Gene

Drugs & Compounds for SNORD14C Gene

No Compound Related Data Available

Transcripts for SNORD14C Gene

mRNA/cDNA for SNORD14C Gene

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD14C Gene

No ASD Table

Relevant External Links for SNORD14C Gene

GeneLoc Exon Structure for
SNORD14C
ECgene alternative splicing isoforms for
SNORD14C

Expression for SNORD14C Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD14C Gene

mRNA differential expression in normal tissues according to GTEx for SNORD14C Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.7) and Brain - Cerebellum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of SNORD14C Gene:

SNORD14C
genes like me logo Genes that share expression patterns with SNORD14C: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD14C Gene

Orthologs for SNORD14C Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD14C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD14 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD14 35
  • 88 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD14 35
  • 88 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD14 35
  • 80 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD14 35
  • 79 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord14c 35
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD14 35
  • 78 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD14 35
  • 79 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD14 35
  • 70 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea SNORD14 35
  • 43 (a)
OneToMany
Species where no ortholog for SNORD14C was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD14C Gene

ENSEMBL:
Gene Tree for SNORD14C (if available)
TreeFam:
Gene Tree for SNORD14C (if available)

Paralogs for SNORD14C Gene

No data available for Paralogs for SNORD14C Gene

Variants for SNORD14C Gene

Sequence variations from dbSNP and Humsavar for SNORD14C Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000333769 -- 123,059,644(+) CTCTA(C/T)TGGGT upstream-variant-2KB, reference, missense
rs1001113413 -- 123,061,368(+) ATTAA(C/T)CAAAA intron-variant, upstream-variant-2KB
rs1002888953 -- 123,061,053(+) CTCAC(A/G)TTTCA intron-variant, upstream-variant-2KB
rs1003257093 -- 123,059,809(+) GAGGC(A/G)TCTTA upstream-variant-2KB, reference, missense
rs1007823799 -- 123,060,450(+) AGAGA(A/G)CCTAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD14C Gene

Variant ID Type Subtype PubMed ID
nsv1039284 CNV gain 25217958
nsv983069 CNV duplication 23825009

Relevant External Links for SNORD14C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD14C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD14C Gene

Disorders for SNORD14C Gene

No disorders were found for SNORD14C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNORD14C Gene

Publications for SNORD14C Gene

  1. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. (PMID: 2251119) Liu J. … Maxwell E.S. (Nucleic Acids Res. 1990) 2 3 64
  2. Structure and expression of a human gene coding for a 71 kd heat shock 'cognate' protein. (PMID: 3037489) Dworniczak B.P. … Mirault M.-E. (Nucleic Acids Res. 1987) 2 3 64
  3. Phylogenetic analysis of the stress-70 protein family. (PMID: 7545947) Rensing S.A. … Maier U.G. (J. Mol. Evol. 1994) 3 64

Products for SNORD14C Gene

Sources for SNORD14C Gene

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