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Aliases for SNORD14B Gene

Subcategory (RNA class) for SNORD14B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD14B Gene

  • Small Nucleolar RNA, C/D Box 14B 2 3 5
  • RNA, U14B Small Nucleolar 2 3
  • SnoRNA 3
  • RNU14B 3
  • U14B 3
  • U14 3

External Ids for SNORD14B Gene

ORGUL Members for SNORD14B Gene

Previous HGNC Symbols for SNORD14B Gene

  • RNU14B

Previous GeneCards Identifiers for SNORD14B Gene

  • GC11M017065
  • GC11M016781
  • GC11M017097
  • GC11M017082
  • GC11M017088
  • GC11M017101
  • GC11M017105
  • GC11M017109

Summaries for SNORD14B Gene

GeneCards Summary for SNORD14B Gene

SNORD14B (Small Nucleolar RNA, C/D Box 14B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD14B Gene

Genomics for SNORD14B Gene

Regulatory Elements for SNORD14B Gene

Enhancers for SNORD14B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G016978 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +91.4 91423 11.2 PKNOX1 ATF1 FOXA2 MLX ZFP64 ZNF133 ARID4B ZNF48 TCF12 FOS RPS13 OR7E14P PLEKHA7 SNORD14B ENSG00000260196 RPL36AP37
GH11G016919 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.5 +152.4 152428 7.1 HDGF PKNOX1 ZFP64 SIN3A ARID4B ZNF48 YY1 ZNF143 ZNF207 FOS OR7E14P PLEKHA7 RPL36AP37 SNORD14B RPS13 GC11M016974 RN7SKP90
GH11G018011 1.3 ENCODE dbSUPER 14.4 -936.7 -936672 3.5 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF548 KLF13 SERGEF SAAL1 SNORD14B SNORD14A GTF2H1 ENSG00000256361 GC11P017952
GH11G016891 1.7 VISTA Ensembl ENCODE dbSUPER 10.5 +182.1 182122 4.9 FOXA2 TEAD4 HLF DPF2 EP300 CTBP1 NFIC ZFHX2 GATA3 SMARCA4 OR7E14P PLEKHA7 RPL36AP37 RPS13 SNORD14B RN7SKP90 GC11M016974
GH11G016901 1.5 FANTOM5 ENCODE dbSUPER 10.5 +173.0 172976 2.9 PKNOX1 WRNIP1 ARID4B SIN3A ZNF48 YY1 GLIS2 CBX5 ZNF207 FOS RPL36AP37 RPS13 SNORD14B OR7E14P RN7SKP90 GC11M016974
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD14B on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD14B Gene

Chromosome:
11
Start:
17,075,778 bp from pter
End:
17,075,868 bp from pter
Size:
91 bases
Orientation:
Minus strand

Genomic View for SNORD14B Gene

Genes around SNORD14B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD14B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD14B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD14B Gene

Proteins for SNORD14B Gene

Post-translational modifications for SNORD14B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD14B Gene

Domains & Families for SNORD14B Gene

Gene Families for SNORD14B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD14B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD14B Gene

Function for SNORD14B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD14B Gene

Localization for SNORD14B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD14B Gene

Pathways & Interactions for SNORD14B Gene

SuperPathways for SNORD14B Gene

No Data Available

Interacting Proteins for SNORD14B Gene

Gene Ontology (GO) - Biological Process for SNORD14B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD14B Gene

Drugs & Compounds for SNORD14B Gene

No Compound Related Data Available

Transcripts for SNORD14B Gene

mRNA/cDNA for SNORD14B Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD14B Gene

No ASD Table

Relevant External Links for SNORD14B Gene

GeneLoc Exon Structure for
SNORD14B
ECgene alternative splicing isoforms for
SNORD14B

Expression for SNORD14B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD14B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD14B Gene:

SNORD14B
genes like me logo Genes that share expression patterns with SNORD14B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD14B Gene

Orthologs for SNORD14B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD14B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD14 35
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD14 35
  • 96 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Snord14a 35
  • 89 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD14 35
  • 87 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORD14 35
  • 63 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD14 35
  • 83 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD14 35
  • 43 (a)
OneToMany
Species where no ortholog for SNORD14B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD14B Gene

ENSEMBL:
Gene Tree for SNORD14B (if available)
TreeFam:
Gene Tree for SNORD14B (if available)

Paralogs for SNORD14B Gene

No data available for Paralogs for SNORD14B Gene

Variants for SNORD14B Gene

Sequence variations from dbSNP and Humsavar for SNORD14B Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000196432 -- 17,076,445(+) CACCT(A/G)TTCGG intron-variant, upstream-variant-2KB
rs1000251438 -- 17,076,726(+) GAGTC(A/C/G)GAGAG intron-variant, upstream-variant-2KB
rs1005833101 -- 17,076,007(+) TACAA(C/T)CTATG intron-variant, upstream-variant-2KB
rs1006388472 -- 17,077,509(+) AGGTG(A/G)CGGCT intron-variant, upstream-variant-2KB
rs1007260235 -- 17,076,852(+) AGGAA(A/C)TGTGT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD14B Gene

Variant ID Type Subtype PubMed ID
nsv467711 CNV gain 19166990
nsv553567 CNV gain 21841781
nsv553568 CNV gain 21841781

Relevant External Links for SNORD14B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD14B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD14B Gene

Disorders for SNORD14B Gene

No disorders were found for SNORD14B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNORD14B Gene

Publications for SNORD14B Gene

  1. U14 snoRNAs are encoded in introns of human ribosomal protein S13 gene. (PMID: 8920921) Kenmochi N. … Tanaka T. (Biochem. Biophys. Res. Commun. 1996) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64
  3. U24, a novel intron-encoded small nucleolar RNA with two 12 nt long, phylogenetically conserved complementarities to 28S rRNA. (PMID: 7651828) Qu L.H. … Bachellerie J.P. (Nucleic Acids Res. 1995) 22 64

Products for SNORD14B Gene

Sources for SNORD14B Gene

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