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Aliases for SNORD13P2 Gene

Aliases for SNORD13P2 Gene

  • Small Nucleolar RNA, C/D Box 13 Pseudogene 2 2 3
  • RNA, U13 Small Nuclear Pseudogene 2 2 3
  • U13.12A 3
  • RNU13P2 3
  • U13 3

External Ids for SNORD13P2 Gene

Previous HGNC Symbols for SNORD13P2 Gene

  • RNU13P2

Previous GeneCards Identifiers for SNORD13P2 Gene

  • GC07P004732
  • GC07P004734
  • GC07P004737
  • GC07P004740

Summaries for SNORD13P2 Gene

GeneCards Summary for SNORD13P2 Gene

SNORD13P2 (Small Nucleolar RNA, C/D Box 13 Pseudogene 2) is a Pseudogene.

Additional gene information for SNORD13P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD13P2 Gene

Genomics for SNORD13P2 Gene

GeneHancer (GH) Regulatory Elements for SNORD13P2 Gene

Promoters and enhancers for SNORD13P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I004690 Enhancer 0.6 Ensembl dbSUPER 550.8 +0.9 872 0.2 HDGF ZBTB33 IKZF2 GC07P004689 SNORD13P2 GC07M004681 FOXK1
GH07I004688 Enhancer 0.6 dbSUPER 550.8 -0.5 -450 1.3 HDAC1 MEIS2 PKNOX1 SOX6 NR2F1 CBFA2T3 EBF1 MNT DPF2 TCF12 GC07P004689 SNORD13P2 GC07M004681 FOXK1
GH07I004681 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -5.9 -5857 4.4 HDGF ARID4B SIN3A YBX1 ZBTB7B YY1 ZNF416 ZNF207 ZNF143 ZNF548 FOXK1 TNRC18 RBAK RNF216P1 AP5Z1 ENSG00000188365 FSCN1 WIPI2 SNORD13P2 GC07M004681
GH07I004686 Enhancer 0.5 dbSUPER 0.8 -2.9 -2919 0.8 ZNF664 MLLT1 ATF2 ZNF18 TNRC18 FOXK1 SNORD13P2 GC07M004681
GH07I004667 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -20.6 -20613 2.9 L3MBTL2 MAFG ZNF316 MAFF ATF4 EMSY MAFK ZBTB17 TNRC18 FOXK1 SNORD13P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD13P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD13P2 Gene

Genomic Locations for SNORD13P2 Gene
chr7:4,689,429-4,689,633
(GRCh38/hg38)
Size:
205 bases
Orientation:
Plus strand
chr7:4,729,060-4,729,264
(GRCh37/hg19)

Genomic View for SNORD13P2 Gene

Genes around SNORD13P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD13P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD13P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD13P2 Gene

Proteins for SNORD13P2 Gene

Post-translational modifications for SNORD13P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD13P2 Gene

Domains & Families for SNORD13P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD13P2 Gene

Function for SNORD13P2 Gene

Phenotypes From GWAS Catalog for SNORD13P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD13P2 Gene

Localization for SNORD13P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD13P2 Gene

Pathways & Interactions for SNORD13P2 Gene

SuperPathways for SNORD13P2 Gene

No Data Available

Interacting Proteins for SNORD13P2 Gene

Gene Ontology (GO) - Biological Process for SNORD13P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD13P2 Gene

Drugs & Compounds for SNORD13P2 Gene

No Compound Related Data Available

Transcripts for SNORD13P2 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD13P2 Gene

No ASD Table

Relevant External Links for SNORD13P2 Gene

GeneLoc Exon Structure for
SNORD13P2
ECgene alternative splicing isoforms for
SNORD13P2

No data available for mRNA/cDNA for SNORD13P2 Gene

Expression for SNORD13P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD13P2 Gene:

SNORD13P2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD13P2 Gene

Orthologs for SNORD13P2 Gene

No data available for Orthologs and Evolution for SNORD13P2 Gene

Paralogs for SNORD13P2 Gene

No data available for Paralogs for SNORD13P2 Gene

Variants for SNORD13P2 Gene

Additional Variant Information for SNORD13P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD13P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD13P2 Gene

Disorders for SNORD13P2 Gene

Additional Disease Information for SNORD13P2

No disorders were found for SNORD13P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD13P2 Gene

Publications for SNORD13P2 Gene

  1. Three pseudogenes for human U13 snRNA belong to class III. (PMID: 1748306) Baserga SJ … Steitz JA (Gene 1991) 2 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for SNORD13P2 Gene

Sources for SNORD13P2 Gene

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