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Aliases for SNORD138 Gene

Subcategory (RNA class) for SNORD138 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for SNORD138 Gene

  • Small Nucleolar RNA, C/D Box 138 2 3
  • MicroRNA 3607 2 3
  • Hsa-Mir-3607 3
  • Mir-3607 3
  • MIR3607 3

External Ids for SNORD138 Gene

Previous HGNC Symbols for SNORD138 Gene

  • MIR3607

Previous GeneCards Identifiers for SNORD138 Gene

  • GC00U936382

Summaries for SNORD138 Gene

GeneCards Summary for SNORD138 Gene

SNORD138 (Small Nucleolar RNA, C/D Box 138) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD138 Gene

Genomics for SNORD138 Gene

Genomic Location for SNORD138 Gene

Chromosome:
5
Orientation:
Unknown strand

Genomic View for SNORD138 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SNORD138 Gene

No data available for Regulatory Elements for SNORD138 Gene

Proteins for SNORD138 Gene

Post-translational modifications for SNORD138 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD138 Gene

Domains & Families for SNORD138 Gene

Gene Families for SNORD138 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD138: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD138 Gene

Function for SNORD138 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD138 Gene

Localization for SNORD138 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD138 Gene

Pathways & Interactions for SNORD138 Gene

SuperPathways for SNORD138 Gene

No Data Available

Interacting Proteins for SNORD138 Gene

Gene Ontology (GO) - Biological Process for SNORD138 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD138 Gene

Drugs & Compounds for SNORD138 Gene

No Compound Related Data Available

Transcripts for SNORD138 Gene

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD138 Gene

No ASD Table

Relevant External Links for SNORD138 Gene

ECgene alternative splicing isoforms for
SNORD138

No data available for mRNA/cDNA for SNORD138 Gene

Expression for SNORD138 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD138 Gene:

SNORD138
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD138 Gene

Orthologs for SNORD138 Gene

No data available for Orthologs and Evolution for SNORD138 Gene

Paralogs for SNORD138 Gene

No data available for Paralogs for SNORD138 Gene

Variants for SNORD138 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD138 Gene

Variant ID Type Subtype PubMed ID
esv3890667 CNV gain 25118596
nsv598839 CNV gain 21841781
nsv830375 CNV gain 17160897

Relevant External Links for SNORD138 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD138 Gene

Disorders for SNORD138 Gene

Relevant External Links for SNORD138

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD138

No disorders were found for SNORD138 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD138 Gene

Publications for SNORD138 Gene

  1. snoStrip: a snoRNA annotation pipeline. (PMID: 24174566) Bartschat S. … Hertel J. (Bioinformatics 2014) 2 3 64
  2. An updated human snoRNAome. (PMID: 27174936) Jorjani H. … Gruber A.R. (Nucleic Acids Res. 2016) 3 64
  3. Regulation of SRC kinases by microRNA-3607 located in a frequently deleted locus in prostate cancer. (PMID: 24817628) Saini S. … Deng G. (Mol. Cancer Ther. 2014) 3 64
  4. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  5. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D. … Lui W.O. (BMC Biol. 2010) 3 64

Products for SNORD138 Gene

Sources for SNORD138 Gene

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