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Aliases for SNORD127 Gene

Subcategory (RNA class) for SNORD127 Gene

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Quality Score for this RNA gene is

3

Aliases for SNORD127 Gene

  • Small Nucleolar RNA, C/D Box 127 2 3

External Ids for SNORD127 Gene

ORGUL Members for SNORD127 Gene

Summaries for SNORD127 Gene

GeneCards Summary for SNORD127 Gene

SNORD127 (Small Nucleolar RNA, C/D Box 127) is an RNA Gene, and belongs to the undefined RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD127 Gene

Genomics for SNORD127 Gene

Genomic Location for SNORD127 Gene

Start:
45,110,875 bp from pter
End:
45,110,975 bp from pter
Size:
101 bases
Orientation:
Plus strand

Genomic View for SNORD127 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD127 Gene

Regulatory Elements for SNORD127 Gene

Proteins for SNORD127 Gene

Post-translational modifications for SNORD127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD127 Gene

Domains for SNORD127 Gene

Gene Families for SNORD127 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD127: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD127 Gene

Function for SNORD127 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD127 Gene

Localization for SNORD127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD127 Gene

Pathways for SNORD127 Gene

SuperPathways for SNORD127 Gene

No Data Available

Interacting Proteins for SNORD127 Gene

Gene Ontology (GO) - Biological Process for SNORD127 Gene

None

No data available for Pathways by source for SNORD127 Gene

Transcripts for SNORD127 Gene

mRNA/cDNA for SNORD127 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD127 Gene

No ASD Table

Relevant External Links for SNORD127 Gene

GeneLoc Exon Structure for
SNORD127
ECgene alternative splicing isoforms for
SNORD127

Expression for SNORD127 Gene

mRNA expression in normal human tissues for SNORD127 Gene

SOURCE GeneReport for Unigene cluster for SNORD127 Gene Hs.712501

genes like me logo Genes that share expressions with SNORD127: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD127 Gene

Orthologs for SNORD127 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD127 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD127 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD127 36
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD127 36
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25970 36
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD127 36
  • 91 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD127 36
  • 82 (a)
OneToMany
SNORD127 36
  • 82 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORD127 36
  • 74 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD127 36
  • 64 (a)
OneToOne
Species with no ortholog for SNORD127:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD127 Gene

ENSEMBL:
Gene Tree for SNORD127 (if available)
TreeFam:
Gene Tree for SNORD127 (if available)

Paralogs for SNORD127 Gene

No data available for Paralogs for SNORD127 Gene

Variants for SNORD127 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD127 Gene

Variant ID Type Subtype PubMed ID
nsv901841 CNV Loss 21882294
nsv901842 CNV Loss 21882294
nsv901843 CNV Gain 21882294
nsv832785 CNV Loss 17160897

Relevant External Links for SNORD127 Gene

HapMap Linkage Disequilibrium report
SNORD127

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD127 Gene

Disorders for SNORD127 Gene

No disorders were found for SNORD127 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD127 Gene

Publications for SNORD127 Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD127 Gene

Sources for SNORD127 Gene

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