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Aliases for SNORD126 Gene

Subcategory (RNA class) for SNORD126 Gene

undefined

Quality Score for this RNA gene is

3

Aliases for SNORD126 Gene

  • Small Nucleolar RNA, C/D Box 126 2 3 5
  • MicroRNA 1201 2 3
  • SNORD126 SnoRNA 3
  • Hsa-Mir-1201 3
  • MIRN1201 3
  • MIR1201 3

External Ids for SNORD126 Gene

ORGUL Members for SNORD126 Gene

Previous HGNC Symbols for SNORD126 Gene

  • MIR1201
  • MIRN1201

Previous GeneCards Identifiers for SNORD126 Gene

  • GC14U900762
  • GC14M019864
  • GC14M020795

Summaries for SNORD126 Gene

GeneCards Summary for SNORD126 Gene

SNORD126 (Small Nucleolar RNA, C/D Box 126) is an RNA Gene, and is affiliated with the undefined RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD126 Gene

Genomics for SNORD126 Gene

Regulatory Elements for SNORD126 Gene

Enhancers for SNORD126 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G020468 1.4 ENCODE dbSUPER 10.5 -145.2 -145190 5.9 HDGF FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 PNP SUPT16H TEP1 CHD8 APEX1 TTC5 ENSG00000260830 RNASE10 RNA5SP382 CCNB1IP1
GH14G020375 0.9 ENCODE 10.9 -51.9 -51925 6.7 ELF3 FOXA2 PKNOX1 MLX ARID4B SIN3A DMAP1 RAD21 ZNF48 RARA TEP1 RNA5SP382 CCNB1IP1 SNORD126 RNASE11 ENSG00000259001 ENSG00000222489 ENSG00000254846
GH14G020605 0.9 ENCODE 10.6 -279.9 -279891 1.2 ELF3 FOXA2 RAD21 RARA ZNF143 MIXL1 ZNF654 HMG20B REST MIER2 RNASE9 RNA5SP382 TEP1 SNORD126 CCNB1IP1 TRP-AGG2-5 RNASE12
GH14G020601 0.9 Ensembl 10.6 -275.4 -275362 0.2 E2F7 ARID4B SIN3A BMI1 DNMT3B ZNF48 RARA ZNF335 EGR1 PCBP1 RNASE9 TEP1 RNA5SP382 SNORD126 CCNB1IP1 TRP-AGG2-5 RNASE12
GH14G020347 0.7 ENCODE 11.2 -21.4 -21418 0.8 PAF1 SAP130 ARID4B ZNF384 PPARG THRB RARA GTF3C2 ZGPAT NR2F6 TEP1 APEX1 SNORD126 RNA5SP382 METTL17 ENSG00000254846
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD126 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD126 Gene

Chromosome:
14
Start:
20,326,441 bp from pter
End:
20,326,539 bp from pter
Size:
99 bases
Orientation:
Minus strand

Genomic View for SNORD126 Gene

Genes around SNORD126 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD126 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD126 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD126 Gene

Proteins for SNORD126 Gene

Post-translational modifications for SNORD126 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD126 Gene

Domains & Families for SNORD126 Gene

Gene Families for SNORD126 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD126: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD126 Gene

Function for SNORD126 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD126 Gene

Localization for SNORD126 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD126 Gene

Pathways & Interactions for SNORD126 Gene

SuperPathways for SNORD126 Gene

No Data Available

Interacting Proteins for SNORD126 Gene

Gene Ontology (GO) - Biological Process for SNORD126 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD126 Gene

Drugs & Compounds for SNORD126 Gene

No Compound Related Data Available

Transcripts for SNORD126 Gene

mRNA/cDNA for SNORD126 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD126 Gene

No ASD Table

Relevant External Links for SNORD126 Gene

GeneLoc Exon Structure for
SNORD126
ECgene alternative splicing isoforms for
SNORD126

Expression for SNORD126 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD126 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD126 Gene:

SNORD126
genes like me logo Genes that share expression patterns with SNORD126: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD126 Gene

Orthologs for SNORD126 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD126 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD126 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD126 35
  • 92 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD126 35
  • 84 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD126 35
  • 83 (a)
OneToOne
Species where no ortholog for SNORD126 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD126 Gene

ENSEMBL:
Gene Tree for SNORD126 (if available)
TreeFam:
Gene Tree for SNORD126 (if available)

Paralogs for SNORD126 Gene

No data available for Paralogs for SNORD126 Gene

Variants for SNORD126 Gene

Sequence variations from dbSNP and Humsavar for SNORD126 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1003933895 -- 20,327,265(+) AAGAA(C/G)TTTTA intron-variant, upstream-variant-2KB
rs1004316433 -- 20,327,418(+) TTATA(C/T)AGGAA intron-variant, upstream-variant-2KB
rs1004489602 -- 20,327,870(+) GTGGG(C/T)CACAA intron-variant, upstream-variant-2KB
rs1008164976 -- 20,327,038(+) GCCAC(C/T)GTACT intron-variant, upstream-variant-2KB
rs1008527380 -- 20,327,243(+) AGTTA(C/T)GCAAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD126 Gene

Variant ID Type Subtype PubMed ID
esv2554946 CNV insertion 19546169
nsv1042025 CNV loss 25217958

Relevant External Links for SNORD126 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD126

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD126 Gene

Disorders for SNORD126 Gene

Relevant External Links for SNORD126

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD126

No disorders were found for SNORD126 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD126 Gene

Publications for SNORD126 Gene

  1. Analysis of C/D box snoRNA genes in vertebrates: The number of copies decreases in placental mammals. (PMID: 19272437) Makarova J.A. … Kramerov D.A. (Genomics 2009) 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64
  3. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3 64

Products for SNORD126 Gene

Sources for SNORD126 Gene

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