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Aliases for SNORD121A Gene

Subcategory (RNA class) for SNORD121A Gene

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Quality Score for this RNA gene is

3

Aliases for SNORD121A Gene

  • Small Nucleolar RNA, C/D Box 121A 2 3

External Ids for SNORD121A Gene

ORGUL Members for SNORD121A Gene

Previous GeneCards Identifiers for SNORD121A Gene

  • GC09U900878

Summaries for SNORD121A Gene

GeneCards Summary for SNORD121A Gene

SNORD121A (Small Nucleolar RNA, C/D Box 121A) is an RNA Gene, and is affiliated with the undefined RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD121A Gene

Genomics for SNORD121A Gene

Regulatory Elements for SNORD121A Gene

Genomic Location for SNORD121A Gene

Start:
33,952,764 bp from pter
End:
33,952,854 bp from pter
Size:
91 bases
Orientation:
Minus strand

Genomic View for SNORD121A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD121A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD121A Gene

Proteins for SNORD121A Gene

Post-translational modifications for SNORD121A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD121A Gene

Domains for SNORD121A Gene

Gene Families for SNORD121A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD121A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD121A Gene

Function for SNORD121A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD121A Gene

Localization for SNORD121A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD121A Gene

Pathways for SNORD121A Gene

SuperPathways for SNORD121A Gene

No Data Available

Interacting Proteins for SNORD121A Gene

Gene Ontology (GO) - Biological Process for SNORD121A Gene

None

No data available for Pathways by source for SNORD121A Gene

Transcripts for SNORD121A Gene

mRNA/cDNA for SNORD121A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD121A Gene

No ASD Table

Relevant External Links for SNORD121A Gene

GeneLoc Exon Structure for
SNORD121A
ECgene alternative splicing isoforms for
SNORD121A

Expression for SNORD121A Gene

mRNA expression in normal human tissues for SNORD121A Gene

genes like me logo Genes that share expressions with SNORD121A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD121A Gene

Orthologs for SNORD121A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD121A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD121A 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD121A 36
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD121A 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23090 36
  • 91 (a)
OneToMany
Gm24837 36
  • 83 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORD121A 36
  • 80 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD121A 36
  • 80 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD121A 36
  • 70 (a)
OneToMany
SNORD121A 36
  • 67 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD121A 36
  • 72 (a)
OneToOne
Species with no ortholog for SNORD121A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD121A Gene

ENSEMBL:
Gene Tree for SNORD121A (if available)
TreeFam:
Gene Tree for SNORD121A (if available)

Paralogs for SNORD121A Gene

No data available for Paralogs for SNORD121A Gene

Variants for SNORD121A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD121A Gene

Variant ID Type Subtype PubMed ID
nsv893028 CNV Gain 21882294
nsv520467 CNV Gain 19592680
nsv831541 CNV Loss 17160897
nsv893030 CNV Gain 21882294
nsv893031 CNV Loss 21882294

Relevant External Links for SNORD121A Gene

HapMap Linkage Disequilibrium report
SNORD121A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD121A Gene

Disorders for SNORD121A Gene

No disorders were found for SNORD121A Gene.

No data available for UniProtKB/Swiss-Prot for SNORD121A Gene

Publications for SNORD121A Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD121A Gene

Sources for SNORD121A Gene

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