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Aliases for SNORD11B Gene

Subcategory (RNA class) for SNORD11B Gene

undefined

Quality Score for this RNA gene is

3

Aliases for SNORD11B Gene

  • Small Nucleolar RNA, C/D Box 11B 2 3

External Ids for SNORD11B Gene

ORGUL Members for SNORD11B Gene

Previous GeneCards Identifiers for SNORD11B Gene

  • GC02U901155
  • GC02P202864
  • GC02P203156
  • GC02P195003

Summaries for SNORD11B Gene

GeneCards Summary for SNORD11B Gene

SNORD11B (Small Nucleolar RNA, C/D Box 11B) is an RNA Gene, and is affiliated with the undefined RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD11B Gene

Genomics for SNORD11B Gene

Regulatory Elements for SNORD11B Gene

Genomic Location for SNORD11B Gene

Start:
202,291,317 bp from pter
End:
202,291,428 bp from pter
Size:
112 bases
Orientation:
Plus strand

Genomic View for SNORD11B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD11B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD11B Gene

Proteins for SNORD11B Gene

Post-translational modifications for SNORD11B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD11B Gene

Domains for SNORD11B Gene

Gene Families for SNORD11B Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD11B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD11B Gene

Function for SNORD11B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD11B Gene

Localization for SNORD11B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD11B Gene

Pathways for SNORD11B Gene

SuperPathways for SNORD11B Gene

No Data Available

Interacting Proteins for SNORD11B Gene

Gene Ontology (GO) - Biological Process for SNORD11B Gene

None

No data available for Pathways by source for SNORD11B Gene

Transcripts for SNORD11B Gene

mRNA/cDNA for SNORD11B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD11B Gene

No ASD Table

Relevant External Links for SNORD11B Gene

GeneLoc Exon Structure for
SNORD11B
ECgene alternative splicing isoforms for
SNORD11B

Expression for SNORD11B Gene

mRNA expression in normal human tissues for SNORD11B Gene

SOURCE GeneReport for Unigene cluster for SNORD11B Gene Hs.693442

genes like me logo Genes that share expressions with SNORD11B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD11B Gene

Orthologs for SNORD11B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD11B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD11B 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD11B 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26287 36
  • 88 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD11B 36
  • 81 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD11B 36
  • 70 (a)
OneToOne
Species with no ortholog for SNORD11B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD11B Gene

ENSEMBL:
Gene Tree for SNORD11B (if available)
TreeFam:
Gene Tree for SNORD11B (if available)

Paralogs for SNORD11B Gene

No data available for Paralogs for SNORD11B Gene

Variants for SNORD11B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD11B Gene

Variant ID Type Subtype PubMed ID
nsv875711 CNV Loss 21882294

Relevant External Links for SNORD11B Gene

HapMap Linkage Disequilibrium report
SNORD11B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD11B Gene

Disorders for SNORD11B Gene

No disorders were found for SNORD11B Gene.

No data available for UniProtKB/Swiss-Prot for SNORD11B Gene

Publications for SNORD11B Gene

  1. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD11B Gene

Sources for SNORD11B Gene

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