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Aliases for SNORD119 Gene

Subcategory (RNA class) for SNORD119 Gene

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Quality Score for this RNA gene is

2

Aliases for SNORD119 Gene

  • Small Nucleolar RNA, C/D Box 119 2 3

External Ids for SNORD119 Gene

ORGUL Members for SNORD119 Gene

Previous GeneCards Identifiers for SNORD119 Gene

  • GC20U900296
  • GC20M002391
  • GC20M002443
  • GC20M002393

Summaries for SNORD119 Gene

GeneCards Summary for SNORD119 Gene

SNORD119 (Small Nucleolar RNA, C/D Box 119) is an RNA Gene, and is affiliated with the undefined RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD119 Gene

Genomics for SNORD119 Gene

Regulatory Elements for SNORD119 Gene

Enhancers for SNORD119 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G002351 1.1 Ensembl ENCODE 11.6 +110.9 110850 0.8 FOXA2 RB1 ARID4B ZNF48 ZSCAN9 RAD21 ZNF143 MIXL1 THAP11 ZNF654 TGM6 SNORD119 TGM3 GC20M002343 GC20P002353
GH20G002468 1.2 ENCODE 0.4 -7.0 -6992 3.5 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC VPS16 ITPA SNRPB SNORD119 GC20M002464
GH20G002467 0.4 ENCODE 0.7 -4.8 -4777 0.0 POLR2A RBFOX2 SNRPB SNORD119 GC20M002464
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD119 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD119 Gene

Chromosome:
20
Start:
2,462,952 bp from pter
End:
2,463,047 bp from pter
Size:
96 bases
Orientation:
Minus strand

Genomic View for SNORD119 Gene

Genes around SNORD119 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD119 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD119 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD119 Gene

Proteins for SNORD119 Gene

Post-translational modifications for SNORD119 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD119 Gene

Domains & Families for SNORD119 Gene

Gene Families for SNORD119 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD119: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD119 Gene

Function for SNORD119 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD119 Gene

Localization for SNORD119 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD119 Gene

Pathways & Interactions for SNORD119 Gene

SuperPathways for SNORD119 Gene

No Data Available

Interacting Proteins for SNORD119 Gene

Gene Ontology (GO) - Biological Process for SNORD119 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD119 Gene

Drugs & Compounds for SNORD119 Gene

No Compound Related Data Available

Transcripts for SNORD119 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD119 Gene

No ASD Table

Relevant External Links for SNORD119 Gene

GeneLoc Exon Structure for
SNORD119
ECgene alternative splicing isoforms for
SNORD119

No data available for mRNA/cDNA for SNORD119 Gene

Expression for SNORD119 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD119 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD119 Gene:

SNORD119
genes like me logo Genes that share expression patterns with SNORD119: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD119 Gene

Orthologs for SNORD119 Gene

No data available for Orthologs and Evolution for SNORD119 Gene

Paralogs for SNORD119 Gene

No data available for Paralogs for SNORD119 Gene

Variants for SNORD119 Gene

Sequence variations from dbSNP and Humsavar for SNORD119 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs771983255 Uncertain significance 2,462,714(+) CCCCA(C/T)TGGGG downstream-variant-500B, reference, missense
rs1001068628 -- 2,462,855(+) GATAG(A/T)TGGAC intron-variant, downstream-variant-500B
rs1003496491 -- 2,464,483(+) AAAAC(A/G)TAAAA intron-variant, upstream-variant-2KB
rs1005480355 -- 2,462,513(+) CTTTC(C/T)GGATT intron-variant, downstream-variant-500B
rs1008070784 -- 2,463,395(+) AGATC(A/G)AGCTT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD119 Gene

Variant ID Type Subtype PubMed ID
esv2758778 CNV gain 17122850
esv3644998 CNV gain 21293372
nsv470535 CNV gain 18288195

Relevant External Links for SNORD119 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD119

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD119 Gene

Disorders for SNORD119 Gene

Relevant External Links for SNORD119

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD119

No disorders were found for SNORD119 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD119 Gene

Publications for SNORD119 Gene

  1. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64
  2. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 3 64

Products for SNORD119 Gene

Sources for SNORD119 Gene

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