Aliases for SNORD116-7 Gene
Subcategory (RNA class) for SNORD116-7 Gene
snoRNA
Quality Score for this RNA gene is
3
External Ids for SNORD116-7 Gene
- HGNC: 33073
- Entrez Gene: 100033419
- Ensembl: ENSG00000207133
Previous GeneCards Identifiers for SNORD116-7 Gene
- GC15P023263
- GC15P023326
- GC15U900938
- GC15P023434
- GC15P023575
- GC15P023669
- GC15P025312
- GC15P003448
Summaries for SNORD116-7 Gene
GeneCards Summary for SNORD116-7 Gene
SNORD116-7 (Small Nucleolar RNA, C/D Box 116-7) is an RNA Gene, and is affiliated with the snoRNA class.
No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD116-7 Gene
Genomics for SNORD116-7 Gene
Regulatory Elements for SNORD116-7 Gene
- Transcription factor binding sites by QIAGEN in the SNORD116-7 gene promoter:
Regulatory Element Products
Genomic Location for SNORD116-7 Gene
- Chromosome:
- 15
- Start:
- 25,067,787 bp from pter
- End:
- 25,067,883 bp from pter
- Size:
- 97 bases
- Orientation:
- Plus strand
Genomic View for SNORD116-7 Gene
Genes around SNORD116-7 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q11.2 by Ensembl
- 15q11.2 by Entrez Gene
- 15q11.2 by HGNC
SNORD116-7 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SNORD116-7 Gene
Proteins for SNORD116-7 Gene
Post-translational modifications for SNORD116-7 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SNORD116-7
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNORD116-7
- Search GeneTex for Proteins for SNORD116-7
Assay Products
No data available for DME Specific Peptides for SNORD116-7 Gene
Domains & Families for SNORD116-7 Gene
Gene Families for SNORD116-7 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD116-7 Gene
Function for SNORD116-7 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for SNORD116-7
CRISPR Products
- Browse CRISPR knockouts for SNORD116-7
miRNA Products
- Search ViGene Biosciences for SNORD116-7
Inhibitory RNA Products
- Search ViGene Biosciences for SNORD116-7
Cell Line Products
- Search ViGene Biosciences for SNORD116-7
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD116-7 Gene
Localization for SNORD116-7 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD116-7 Gene
More details on SuperPathways for SNORD116-7Transcripts for SNORD116-7 Gene
mRNA/cDNA for SNORD116-7 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SNORD116-7
miRNA Products
- Search ViGene Biosciences for SNORD116-7
Inhibitory RNA Products
- Search ViGene Biosciences for SNORD116-7
Flow Cytometry Products
Relevant External Links for SNORD116-7 Gene
- GeneLoc Exon Structure for
- SNORD116-7
- ECgene alternative splicing isoforms for
- SNORD116-7
Expression for SNORD116-7 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD116-7 Gene
Orthologs for SNORD116-7 Gene
This gene was present in the common ancestor of human and mouse.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| mouse (Mus musculus) |
Mammalia | Gm22046 36 |
|
ManyToMany | |
| Gm22047 36 |
|
ManyToMany | |||
| Gm22110 36 |
|
ManyToMany | |||
| Gm22128 36 |
|
ManyToMany | |||
| Gm22131 36 |
|
ManyToMany | |||
| Gm22173 36 |
|
ManyToMany | |||
| Gm22188 36 |
|
ManyToMany | |||
| Gm22258 36 |
|
ManyToMany | |||
| Gm22285 36 |
|
ManyToMany | |||
| Gm22289 36 |
|
ManyToMany | |||
| Gm22417 36 |
|
ManyToMany | |||
| Gm22584 36 |
|
ManyToMany | |||
| Gm22631 36 |
|
ManyToMany | |||
| Gm22776 36 |
|
ManyToMany | |||
| Gm22812 36 |
|
ManyToMany | |||
| Gm22851 36 |
|
ManyToMany | |||
| Gm22863 36 |
|
ManyToMany | |||
| Gm22941 36 |
|
ManyToMany | |||
| Gm23047 36 |
|
ManyToMany | |||
| Gm23089 36 |
|
ManyToMany | |||
| Gm23141 36 |
|
ManyToMany | |||
| Gm23265 36 |
|
ManyToMany | |||
| Gm23313 36 |
|
ManyToMany | |||
| Gm23357 36 |
|
ManyToMany | |||
| Gm23359 36 |
|
ManyToMany | |||
| Gm23446 36 |
|
ManyToMany | |||
| Gm23524 36 |
|
ManyToMany | |||
| Gm23549 36 |
|
ManyToMany | |||
| Gm23619 36 |
|
ManyToMany | |||
| Gm23696 36 |
|
ManyToMany | |||
| Gm23724 36 |
|
ManyToMany | |||
| Gm23767 36 |
|
ManyToMany | |||
| Gm23862 36 |
|
ManyToMany | |||
| Gm23953 36 |
|
ManyToMany | |||
| Gm24153 36 |
|
ManyToMany | |||
| Gm24264 36 |
|
ManyToMany | |||
| Gm24518 36 |
|
ManyToMany | |||
| Gm24609 36 |
|
ManyToMany | |||
| Gm24618 36 |
|
ManyToMany | |||
| Gm24658 36 |
|
ManyToMany | |||
| Gm24711 36 |
|
ManyToMany | |||
| Gm24742 36 |
|
ManyToMany | |||
| Gm24760 36 |
|
ManyToMany | |||
| Gm25074 36 |
|
ManyToMany | |||
| Gm25155 36 |
|
ManyToMany | |||
| Gm25157 36 |
|
ManyToMany | |||
| Gm25210 36 |
|
ManyToMany | |||
| Gm25350 36 |
|
ManyToMany | |||
| Gm25471 36 |
|
ManyToMany | |||
| Gm25474 36 |
|
ManyToMany | |||
| Gm25597 36 |
|
ManyToMany | |||
| Gm25615 36 |
|
ManyToMany | |||
| Gm25816 36 |
|
ManyToMany | |||
| Gm25944 36 |
|
ManyToMany | |||
| Gm26032 36 |
|
ManyToMany | |||
| Gm26094 36 |
|
ManyToMany | |||
| Gm26097 36 |
|
ManyToMany | |||
| Gm26136 36 |
|
ManyToMany | |||
| Gm26188 36 |
|
ManyToMany | |||
| Gm26201 36 |
|
ManyToMany | |||
| Gm26223 36 |
|
ManyToMany | |||
| Gm26246 36 |
|
ManyToMany | |||
| Gm26270 36 |
|
ManyToMany | |||
| Gm26332 36 |
|
ManyToMany | |||
| Gm26433 36 |
|
ManyToMany | |||
| Gm26502 36 |
|
ManyToMany | |||
| Gm26504 36 |
|
ManyToMany | |||
| Snord116l1 36 |
|
ManyToMany | |||
| Snord116l2 36 |
|
ManyToMany | |||
| chimpanzee (Pan troglodytes) |
Mammalia | SNORD116 36 |
|
OneToOne |
- Species with no ortholog for SNORD116-7:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Evolution for SNORD116-7 Gene
- ENSEMBL:
- Gene Tree for SNORD116-7 (if available)
- TreeFam:
- Gene Tree for SNORD116-7 (if available)
Paralogs for SNORD116-7 Gene
No data available for Paralogs for SNORD116-7 Gene
Variants for SNORD116-7 Gene
| SNP ID | Clin | Chr 15 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs11856915 | -- | 25,066,695(+) | GGAAG(C/G)AAGTG | upstream-variant-2KB | |
| rs6576403 | -- | 25,068,296(+) | AGAGC(A/G)CAGAG | downstream-variant-500B | |
| rs7172797 | -- | 25,066,901(+) | GGAGG(A/C)CTGTG | upstream-variant-2KB | |
| rs62001998 | -- | 25,067,107(+) | TGTGG(G/T)GGAGA | upstream-variant-2KB | |
| rs62001999 | -- | 25,067,765(+) | CAAAT(A/G)TTCTG | upstream-variant-2KB |
Relevant External Links for SNORD116-7 Gene
- HapMap Linkage Disequilibrium report
- SNORD116-7
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD116-7 Gene
Disorders for SNORD116-7 Gene
Relevant External Links for SNORD116-7
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- SNORD116-7
No disorders were found for SNORD116-7 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD116-7 Gene
Publications for SNORD116-7 Gene
- The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 2 3 67
- Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 2 3
- Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
Products for SNORD116-7 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNORD116-7
- Browse OriGene Inhibitory RNA Products For SNORD116-7
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SNORD116-7
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- GenScript: Custom all cDNA clones Services for SNORD116-7
- GenScript Custom Purified and Recombinant Proteins Services for SNORD116-7
- GenScript Custom Assay Services for SNORD116-7
- GenScript Custom overexpressing Cell Line Services for SNORD116-7
- Browse GenScript CRISPR for SNORD116-7
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for SNORD116-7
- Search ViGene Biosciences for SNORD116-7
- Search ViGene Biosciences for SNORD116-7
- Search ViGene Biosciences for SNORD116-7
- Search ViGene Biosciences for SNORD116-7
Sources for SNORD116-7 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) I2D
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) RNAdb
- (30) ASD
- (31) ECgene
- (32) GeneAnnot
- (33) SAGE
- (34) SOURCE
- (35) HomoloGene
- (36) PanEnsembl
- (37) euGenes
- (38) SGD
- (39) FlyBase
- (40) WormBase
- (41) Pseudogene
- (42) DGV
- (43) dbSNP
- (44) HapMap
- (45) GenAtlas
- (46) GeneTests
- (47) HGMD
- (48) GAD
- (49) LSDB
- (50) BGMUT
- (51) HuGE
- (52) eBioscience
- (53) Atlas
- (54) Cell Signaling Technology
- (55) GenBank
- (56) H-invDB
- (57) HORDE
- (58) HUGE
- (59) IMGT
- (60) Leiden
- (61) MILLIPORE
- (62) miRBase
- (63) DME
- (64) Nature
- (65) NCBI
- (66) OriGene
- (67) PubMed
- (68) R&D Systems
- (69) Salk
- (70) TGDB
- (71) Tufts
- (72) YEDA
- (73) CROW21
- (74) Tocris
- (75) Abcam
- (76) Novus
- (77) ProSpec
- (78) Sino Biological
- (79) GenScript
- (80) Qiagen
- (81) Cloud-Clone Corp.
- (82) Enzo Life Sciences
- (83) OCA
- (84) Proteopedia
- (85) MOPED
- (86) SPIRE
- (87) neXtProt
- (88) Reactome
- (89) GeneGo (Thomson Reuters)
- (90) fRNAdb
- (91) DISEASES
- (92) SIMAP
- (93) GenomeRNAi
- (94) LifeMap
- (95) miRTarBase
- (96) MalaCards
- (97) Invitrogen
- (98) BitterDB
- (99) Vector BioLabs
- (100) ESI-BIO
- (101) RefSeq
- (102) BioSystems
- (103) MaxQB
- (104) IUPHAR
- (105) BioGPS
- (106) Illumina
- (107) COMPARTMENTS
- (108) HOMER
- (109) PaxDb
- (110) ApexBio
- (111) Addgene
- (112) Advanced Cell Diagnostics
- (113) antibodies-online
- (114) CYP
- (115) NONCODE
- (116) SwitchGear Genomics
- (117) TreeFam
- (118) PathCards
- (119) GeneReviews
- (120) GeneTex
- (121) Taconic Biosciences
- (122) GTEx
- (123) ProteomicsDB
- (124) SCBT
- (125) DGIdb
- (126) ClinicalTrials
- (127) FDA Approved Drugs
- (128) RVIS
- (129) SIGNOR
- (130) diseasecard
- (131) NIH Rare Diseases
- (132) Orphanet
- (133) UMLS
- (134) GTR
- (135) Disease Ontology
- (136) Genetics Home Reference
- (137) MeSH
- (138) MedlinePlus
- (139) CDC
- (140) NINDS
- (141) NCBI Bookshelf
- (142) ClinVar
- (143) Gene Damage Index
- (144) ViGene Biosciences
- (145) HPO
- (146) UDN
- (147) VISTA
- (148) FANTOM5
- (149) ENCODE
- (150) ProSci
- (151) Horizon