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Aliases for SNORD116-22 Gene

Subcategory (RNA class) for SNORD116-22 Gene


Quality Score for this RNA gene is


Aliases for SNORD116-22 Gene

  • Small Nucleolar RNA, C/D Box 116-22 2 3 5
  • HBII-85-22 3

External Ids for SNORD116-22 Gene

ORGUL Members for SNORD116-22 Gene

Previous GeneCards Identifiers for SNORD116-22 Gene

  • GC15P023251
  • GC15P023321
  • GC15U900827
  • GC15P023449
  • GC15P023530
  • GC15P023628
  • GC15P025335
  • GC15P003470
  • GC15P025226

Summaries for SNORD116-22 Gene

GeneCards Summary for SNORD116-22 Gene

SNORD116-22 (Small Nucleolar RNA, C/D Box 116-22) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD116-22 Gene

Genomics for SNORD116-22 Gene

Regulatory Elements for SNORD116-22 Gene

Transcription factor binding sites by QIAGEN in the SNORD116-22 gene promoter:

Genomic Location for SNORD116-22 Gene

25,089,922 bp from pter
25,090,015 bp from pter
94 bases
Plus strand

Genomic View for SNORD116-22 Gene

Genes around SNORD116-22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD116-22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD116-22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD116-22 Gene

Proteins for SNORD116-22 Gene

Post-translational modifications for SNORD116-22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD116-22 Gene

Domains & Families for SNORD116-22 Gene

Gene Families for SNORD116-22 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD116-22: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD116-22 Gene

Function for SNORD116-22 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD116-22 Gene

Localization for SNORD116-22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD116-22 Gene

Pathways & Interactions for SNORD116-22 Gene

SuperPathways for SNORD116-22 Gene

No Data Available

Interacting Proteins for SNORD116-22 Gene

Gene Ontology (GO) - Biological Process for SNORD116-22 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD116-22 Gene

Transcripts for SNORD116-22 Gene

mRNA/cDNA for SNORD116-22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD116-22 Gene

No ASD Table

Relevant External Links for SNORD116-22 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD116-22 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD116-22 Gene

Orthologs for SNORD116-22 Gene

Evolution for SNORD116-22 Gene

Gene Tree for SNORD116-22 (if available)
Gene Tree for SNORD116-22 (if available)

No data available for Orthologs for SNORD116-22 Gene

Paralogs for SNORD116-22 Gene

No data available for Paralogs for SNORD116-22 Gene

Variants for SNORD116-22 Gene

Sequence variations from dbSNP and Humsavar for SNORD116-22 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs113064344 -- 25,089,033(+) TCCCA(C/T)GTATA downstream-variant-500B, upstream-variant-2KB
rs114343820 -- 25,089,584(+) TCCTT(G/T)TGTCC upstream-variant-2KB
rs114543939 -- 25,090,432(+) TATCC(A/G)TAGGA downstream-variant-500B, upstream-variant-2KB
rs115118857 -- 25,088,671(+) AGCTG(C/T)GGAGA upstream-variant-2KB
rs115575523 -- 25,089,657(+) GGAGC(C/T)GGATG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD116-22 Gene

Variant ID Type Subtype PubMed ID
dgv2476n100 CNV gain 25217958
nsv1038717 CNV gain 25217958
nsv977678 CNV duplication 23825009

Relevant External Links for SNORD116-22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD116-22 Gene

Disorders for SNORD116-22 Gene

Relevant External Links for SNORD116-22

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD116-22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD116-22 Gene

Publications for SNORD116-22 Gene

  1. The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 2 3 64
  2. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 2 3 64
  3. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3 64
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD116-22 Gene

Sources for SNORD116-22 Gene

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