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Aliases for SNORD116-21 Gene

Subcategory (RNA class) for SNORD116-21 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORD116-21 Gene

  • Small Nucleolar RNA, C/D Box 116-21 2 3
  • HBII-85-21 3

External Ids for SNORD116-21 Gene

ORGUL Members for SNORD116-21 Gene

Previous GeneCards Identifiers for SNORD116-21 Gene

  • GC15P023248
  • GC15P023314
  • GC15U900780
  • GC15P023448
  • GC15P023529
  • GC15P023627
  • GC15P025333
  • GC15P025414
  • GC15P025696

Summaries for SNORD116-21 Gene

GeneCards Summary for SNORD116-21 Gene

SNORD116-21 (Small Nucleolar RNA, C/D Box 116-21) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD116-21 Gene

Genomics for SNORD116-21 Gene

Regulatory Elements for SNORD116-21 Gene

Transcription factor binding sites by QIAGEN in the SNORD116-21 gene promoter:

Genomic Location for SNORD116-21 Gene

Chromosome:
15
Start:
25,088,803 bp from pter
End:
25,088,896 bp from pter
Size:
94 bases
Orientation:
Plus strand

Genomic View for SNORD116-21 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD116-21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD116-21 Gene

Proteins for SNORD116-21 Gene

Post-translational modifications for SNORD116-21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD116-21 Gene

Domains & Families for SNORD116-21 Gene

Gene Families for SNORD116-21 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD116-21: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD116-21 Gene

Function for SNORD116-21 Gene

miRNA for SNORD116-21 Gene

miRTarBase miRNAs that target SNORD116-21

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for SNORD116-21 Gene

Localization for SNORD116-21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD116-21 Gene

Pathways & Interactions for SNORD116-21 Gene

SuperPathways for SNORD116-21 Gene

No Data Available

Interacting Proteins for SNORD116-21 Gene

Gene Ontology (GO) - Biological Process for SNORD116-21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD116-21 Gene

Drugs & Compounds for SNORD116-21 Gene

No Compound Related Data Available

Transcripts for SNORD116-21 Gene

mRNA/cDNA for SNORD116-21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD116-21 Gene

No ASD Table

Relevant External Links for SNORD116-21 Gene

GeneLoc Exon Structure for
SNORD116-21
ECgene alternative splicing isoforms for
SNORD116-21

Expression for SNORD116-21 Gene

mRNA expression in normal human tissues for SNORD116-21 Gene

genes like me logo Genes that share expression patterns with SNORD116-21: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD116-21 Gene

Orthologs for SNORD116-21 Gene

Evolution for SNORD116-21 Gene

ENSEMBL:
Gene Tree for SNORD116-21 (if available)
TreeFam:
Gene Tree for SNORD116-21 (if available)

No data available for Orthologs for SNORD116-21 Gene

Paralogs for SNORD116-21 Gene

No data available for Paralogs for SNORD116-21 Gene

Variants for SNORD116-21 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD116-21 Gene

Variant ID Type Subtype PubMed ID
esv29021 CNV Gain+Loss 19812545
nsv903721 CNV Gain 21882294
esv2749457 CNV Deletion 23290073
dgv445e199 CNV Deletion 23128226

Relevant External Links for SNORD116-21 Gene

HapMap Linkage Disequilibrium report
SNORD116-21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD116-21 Gene

Disorders for SNORD116-21 Gene

Relevant External Links for SNORD116-21

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD116-21
genes like me logo Genes that share disorders with SNORD116-21: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD116-21 Gene

Publications for SNORD116-21 Gene

  1. The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 2 67
  2. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 2 67
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67

Products for SNORD116-21 Gene

Sources for SNORD116-21 Gene

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