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Aliases for SNORD116-14 Gene

Subcategory (RNA class) for SNORD116-14 Gene


Quality Score for this RNA gene is


Aliases for SNORD116-14 Gene

  • Small Nucleolar RNA, C/D Box 116-14 2 3 5
  • HBII-85-14 3

External Ids for SNORD116-14 Gene

ORGUL Members for SNORD116-14 Gene

Previous GeneCards Identifiers for SNORD116-14 Gene

  • GC15P023253
  • GC15P023335
  • GC15U900853
  • GC15P023441
  • GC15P023523
  • GC15P023622
  • GC15P025325
  • GC15P003461

Summaries for SNORD116-14 Gene

GeneCards Summary for SNORD116-14 Gene

SNORD116-14 (Small Nucleolar RNA, C/D Box 116-14) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD116-14 Gene

Genomics for SNORD116-14 Gene

Regulatory Elements for SNORD116-14 Gene

Transcription factor binding sites by QIAGEN in the SNORD116-14 gene promoter:

Genomic Location for SNORD116-14 Gene

25,080,141 bp from pter
25,080,234 bp from pter
94 bases
Plus strand

Genomic View for SNORD116-14 Gene

Genes around SNORD116-14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD116-14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD116-14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD116-14 Gene

Proteins for SNORD116-14 Gene

Post-translational modifications for SNORD116-14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD116-14 Gene

Domains & Families for SNORD116-14 Gene

Gene Families for SNORD116-14 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD116-14: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD116-14 Gene

Function for SNORD116-14 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD116-14 Gene

Localization for SNORD116-14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD116-14 Gene

Pathways & Interactions for SNORD116-14 Gene

SuperPathways for SNORD116-14 Gene

No Data Available

Interacting Proteins for SNORD116-14 Gene

Gene Ontology (GO) - Biological Process for SNORD116-14 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD116-14 Gene

Transcripts for SNORD116-14 Gene

mRNA/cDNA for SNORD116-14 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD116-14 Gene

No ASD Table

Relevant External Links for SNORD116-14 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD116-14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORD116-14 Gene

genes like me logo Genes that share expression patterns with SNORD116-14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD116-14 Gene

Orthologs for SNORD116-14 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SNORD116-14 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD116 35
  • 100 (a)
(Mus musculus)
Mammalia Gm22373 35
  • 72 (a)
Species where no ortholog for SNORD116-14 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD116-14 Gene

Gene Tree for SNORD116-14 (if available)
Gene Tree for SNORD116-14 (if available)

Paralogs for SNORD116-14 Gene

No data available for Paralogs for SNORD116-14 Gene

Variants for SNORD116-14 Gene

Sequence variations from dbSNP and Humsavar for SNORD116-14 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs11161166 -- 25,079,530(+) CTGGC(A/T)TAGCT downstream-variant-500B, upstream-variant-2KB
rs112199872 -- 25,080,531(+) GTACC(A/G)AAGTC downstream-variant-500B, upstream-variant-2KB
rs113070088 -- 25,079,707(+) ACATT(A/G)TAGGT upstream-variant-2KB
rs114172148 -- 25,080,647(+) TACCC(G/T)GCATA downstream-variant-500B, upstream-variant-2KB
rs114965851 -- 25,080,054(+) TTCCT(A/T)GGAGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD116-14 Gene

Variant ID Type Subtype PubMed ID
dgv2474n100 CNV gain 25217958
dgv2476n100 CNV gain 25217958
dgv2477n100 CNV loss 25217958
esv29021 CNV gain+loss 19812545
esv3584898 CNV gain 24956385
nsv1038717 CNV gain 25217958
nsv1045067 CNV gain 25217958
nsv977677 CNV duplication 23825009

Relevant External Links for SNORD116-14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD116-14 Gene

Disorders for SNORD116-14 Gene

Relevant External Links for SNORD116-14

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD116-14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD116-14 Gene

Publications for SNORD116-14 Gene

  1. The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 2 3 64
  2. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD116-14 Gene

Sources for SNORD116-14 Gene

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