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Aliases for SNORD115-46 Gene

Subcategory (RNA class) for SNORD115-46 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD115-46 Gene

  • Small Nucleolar RNA, C/D Box 115-46 2 3
  • HBII-52-46 3

External Ids for SNORD115-46 Gene

ORGUL Members for SNORD115-46 Gene

Previous GeneCards Identifiers for SNORD115-46 Gene

  • GC00U933586
  • GC15P025519
  • GC15P025522
  • GC15P025534
  • GC15U901568

Summaries for SNORD115-46 Gene

GeneCards Summary for SNORD115-46 Gene

SNORD115-46 (Small Nucleolar RNA, C/D Box 115-46) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD115-46 Gene

Genomics for SNORD115-46 Gene

Genomic Location for SNORD115-46 Gene

Start:
25,266,591 bp from pter
End:
25,266,661 bp from pter
Size:
71 bases
Orientation:
Plus strand

Genomic View for SNORD115-46 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD115-46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD115-46 Gene

No data available for Regulatory Elements for SNORD115-46 Gene

Proteins for SNORD115-46 Gene

Post-translational modifications for SNORD115-46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD115-46 Gene

Domains for SNORD115-46 Gene

Gene Families for SNORD115-46 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD115-46: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD115-46 Gene

Function for SNORD115-46 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD115-46 Gene

Localization for SNORD115-46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD115-46 Gene

Pathways for SNORD115-46 Gene

SuperPathways for SNORD115-46 Gene

No Data Available

Interacting Proteins for SNORD115-46 Gene

Gene Ontology (GO) - Biological Process for SNORD115-46 Gene

None

No data available for Pathways by source for SNORD115-46 Gene

Transcripts for SNORD115-46 Gene

mRNA/cDNA for SNORD115-46 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD115-46 Gene

No ASD Table

Relevant External Links for SNORD115-46 Gene

GeneLoc Exon Structure for
SNORD115-46
ECgene alternative splicing isoforms for
SNORD115-46

Expression for SNORD115-46 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD115-46 Gene

Orthologs for SNORD115-46 Gene

Evolution for SNORD115-46 Gene

ENSEMBL:
Gene Tree for SNORD115-46 (if available)
TreeFam:
Gene Tree for SNORD115-46 (if available)

No data available for Orthologs for SNORD115-46 Gene

Paralogs for SNORD115-46 Gene

No data available for Paralogs for SNORD115-46 Gene

Variants for SNORD115-46 Gene

Sequence variations from dbSNP and Humsavar for SNORD115-46 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs35584065 -- 25,265,645(+) CTACC(-/T)TTTTT upstream-variant-2KB
rs60590118 -- 25,265,662(+) TTTTT(-/T)GAGAC upstream-variant-2KB
rs72697726 -- 25,265,539(+) TTCCT(C/T)ATGAT upstream-variant-2KB
rs75892769 -- 25,266,382(+) ACACA(A/G)GTGAG upstream-variant-2KB
rs78481984 -- 25,265,818(+) TTTTT(G/T)GTAAT upstream-variant-2KB

Relevant External Links for SNORD115-46 Gene

HapMap Linkage Disequilibrium report
SNORD115-46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SNORD115-46 Gene

Disorders for SNORD115-46 Gene

No disorders were found for SNORD115-46 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD115-46 Gene

Publications for SNORD115-46 Gene

  1. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3
  2. The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 3

Products for SNORD115-46 Gene

Sources for SNORD115-46 Gene

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