Aliases for SNORD115-43 Gene
Subcategory (RNA class) for SNORD115-43 Gene
snoRNA
Quality Score for this RNA gene is
3
External Ids for SNORD115-43 Gene
- HGNC: 33062
- Entrez Gene: 100033817
- Ensembl: ENSG00000202373
Previous GeneCards Identifiers for SNORD115-43 Gene
- GC15U900709
- GC15P023494
- GC15P023570
- GC15P023673
- GC15P025494
- GC15P003618
- GC15P025271
- GC15P025385
- GC15P025441
- GC15P025542
- GC15P025611
- GC15P025656
- GC15P025736
Summaries for SNORD115-43 Gene
GeneCards Summary for SNORD115-43 Gene
SNORD115-43 (Small Nucleolar RNA, C/D Box 115-43) is an RNA Gene, and is affiliated with the snoRNA class.
Additional gene information for SNORD115-43 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD115-43 Gene
Genomics for SNORD115-43 Gene
GeneHancer (GH) Regulatory Elements for SNORD115-43 Gene
Regulatory Element Products
Genomic Locations for SNORD115-43 Gene
Genomic Locations for SNORD115-43 Gene
- chr15:25,249,198-25,249,279
- (GRCh38/hg38)
- Size:
- 82 bases
- Orientation:
- Plus strand
- chr15:25,494,345-25,494,426
- (GRCh37/hg19)
Genomic View for SNORD115-43 Gene
Genes around SNORD115-43 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q11.2 by Ensembl
- 15q11.2 by Entrez Gene
- 15q11.2 by HGNC
SNORD115-43 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)


RefSeq DNA sequence for SNORD115-43 Gene
Proteins for SNORD115-43 Gene
Post-translational modifications for SNORD115-43 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SNORD115-43
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNORD115-43
- Origene Custom Protein Services for SNORD115-43
- Search GeneTex for Proteins for SNORD115-43
No data available for DME Specific Peptides for SNORD115-43 Gene
Domains & Families for SNORD115-43 Gene
Gene Families for SNORD115-43 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD115-43 Gene
Function for SNORD115-43 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SNORD115-43
-
- Search ViGene Biosciences for SNORD115-43
CRISPR Products
- Browse CRISPR knockouts for SNORD115-43
- Applied Biological Materials CRISPR for SNORD115-43
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SNORD115-43
Inhibitory RNA Products
- Search ViGene Biosciences for SNORD115-43
Clone Products
- GenScript: Custom all cDNA clones Services for SNORD115-43
- VectorBuilder custom plasmid, inducible vectors for SNORD115-43
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNORD115-43
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SNORD115-43
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD115-43 Gene
Localization for SNORD115-43 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD115-43 Gene
Transcripts for SNORD115-43 Gene
mRNA/cDNA for SNORD115-43 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SNORD115-43
- Applied Biological Materials CRISPR for SNORD115-43
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SNORD115-43
Inhibitory RNA Products
- Search ViGene Biosciences for SNORD115-43
Clone Products
- GenScript: Custom all cDNA clones Services for SNORD115-43
- VectorBuilder custom plasmid, inducible vectors for SNORD115-43
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNORD115-43
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SNORD115-43
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Relevant External Links for SNORD115-43 Gene
- GeneLoc Exon Structure for
- SNORD115-43
- ECgene alternative splicing isoforms for
- SNORD115-43
Expression for SNORD115-43 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD115-43 Gene
Orthologs for SNORD115-43 Gene
This gene was present in the common ancestor of mammals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
chimpanzee (Pan troglodytes) |
Mammalia | SNORD115 34 |
|
OneToOne | |
dog (Canis familiaris) |
Mammalia | SNORD115 34 |
|
ManyToMany | |
mouse (Mus musculus) |
Mammalia | Gm25499 34 |
|
ManyToMany | |
Gm22496 34 |
|
ManyToMany | |||
cow (Bos Taurus) |
Mammalia | SNORD115 34 |
|
ManyToMany |
- Species where no ortholog for SNORD115-43 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Evolution for SNORD115-43 Gene
- ENSEMBL:
- Gene Tree for SNORD115-43 (if available)
- TreeFam:
- Gene Tree for SNORD115-43 (if available)
Paralogs for SNORD115-43 Gene
No data available for Paralogs for SNORD115-43 Gene
Variants for SNORD115-43 Gene
SNP ID | Clin | Chr 15 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000541346 | -- | 25,249,551(+) | G/A | downstream_transcript_variant | |
rs1001398809 | -- | 25,248,533(+) | G/C | upstream_transcript_variant | |
rs1002357176 | -- | 25,247,546(+) | C/A | upstream_transcript_variant | |
rs1002839249 | -- | 25,247,362(+) | C/G | upstream_transcript_variant | |
rs1003407204 | -- | 25,248,194(+) | G/A | upstream_transcript_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv2478n100 | CNV | gain | 25217958 |
dgv2479n100 | CNV | gain | 25217958 |
dgv2480n100 | CNV | loss | 25217958 |
dgv2481n100 | CNV | gain | 25217958 |
dgv2482n100 | CNV | gain | 25217958 |
dgv2483n100 | CNV | gain+loss | 25217958 |
dgv2484n100 | CNV | loss | 25217958 |
dgv2485n100 | CNV | loss | 25217958 |
dgv2486n100 | CNV | gain | 25217958 |
dgv4390n54 | CNV | loss | 21841781 |
dgv4391n54 | CNV | loss | 21841781 |
dgv722e212 | CNV | loss | 25503493 |
esv25915 | CNV | gain+loss | 19812545 |
esv2761832 | CNV | gain+loss | 21179565 |
esv33464 | CNV | gain | 17666407 |
esv3569320 | CNV | gain | 25503493 |
esv3584909 | CNV | gain | 24956385 |
nsv1045485 | CNV | gain+loss | 25217958 |
nsv1046185 | CNV | loss | 25217958 |
nsv1048425 | CNV | gain | 25217958 |
nsv1053030 | CNV | loss | 25217958 |
nsv1467 | CNV | deletion | 18451855 |
nsv456731 | CNV | loss | 19166990 |
nsv517360 | CNV | gain+loss | 19592680 |
nsv568550 | CNV | loss | 21841781 |
nsv568564 | CNV | loss | 21841781 |
nsv952576 | CNV | deletion | 24416366 |
nsv976898 | CNV | duplication | 23825009 |
Additional Variant Information for SNORD115-43 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SNORD115-43
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD115-43 Gene
Disorders for SNORD115-43 Gene
Additional Disease Information for SNORD115-43
No disorders were found for SNORD115-43 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD115-43 Gene
Publications for SNORD115-43 Gene
- The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M … Buiting K (Human molecular genetics 2001) 2 3 58
- Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) Cavaillé J … Hüttenhofer A (Proceedings of the National Academy of Sciences of the United States of America 2000) 2 3 58
- Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58
- The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. (PMID: 16357227) Kishore S … Stamm S (Science (New York, N.Y.) 2006) 3 58
- Exclusion of the C/D box snoRNA gene cluster HBII-52 from a major role in Prader-Willi syndrome. (PMID: 15565282) Runte M … Buiting K (Human genetics 2005) 3 58
Products for SNORD115-43 Gene
- Browse R&D Systems for Antibodies
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SNORD115-43
- VectorBuilder custom plasmid, inducible vectors for SNORD115-43
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNORD115-43
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SNORD115-43
- Search GeneTex for Proteins for SNORD115-43
Sources for SNORD115-43 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
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- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
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- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew