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Aliases for SNORD115-13 Gene

Subcategory (RNA class) for SNORD115-13 Gene


Quality Score for this RNA gene is


Aliases for SNORD115-13 Gene

  • Small Nucleolar RNA, C/D Box 115-13 2 3 5
  • HBII-52-13 3

External Ids for SNORD115-13 Gene

ORGUL Members for SNORD115-13 Gene

Previous GeneCards Identifiers for SNORD115-13 Gene

  • GC15U900730
  • GC15P023465
  • GC15P023544
  • GC15P023641
  • GC15P025438
  • GC15P003562
  • GC15P025243
  • GC15P025247
  • GC15P025289

Summaries for SNORD115-13 Gene

GeneCards Summary for SNORD115-13 Gene

SNORD115-13 (Small Nucleolar RNA, C/D Box 115-13) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD115-13 Gene

Genomics for SNORD115-13 Gene

Regulatory Elements for SNORD115-13 Gene

Transcription factor binding sites by QIAGEN in the SNORD115-13 gene promoter:

Genomic Location for SNORD115-13 Gene

25,193,321 bp from pter
25,193,402 bp from pter
82 bases
Plus strand

Genomic View for SNORD115-13 Gene

Genes around SNORD115-13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD115-13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD115-13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD115-13 Gene

Proteins for SNORD115-13 Gene

Post-translational modifications for SNORD115-13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD115-13 Gene

Domains & Families for SNORD115-13 Gene

Gene Families for SNORD115-13 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD115-13: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD115-13 Gene

Function for SNORD115-13 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD115-13 Gene

Localization for SNORD115-13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD115-13 Gene

Pathways & Interactions for SNORD115-13 Gene

SuperPathways for SNORD115-13 Gene

No Data Available

Interacting Proteins for SNORD115-13 Gene

Gene Ontology (GO) - Biological Process for SNORD115-13 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD115-13 Gene

Drugs & Compounds for SNORD115-13 Gene

No Compound Related Data Available

Transcripts for SNORD115-13 Gene

mRNA/cDNA for SNORD115-13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD115-13 Gene

No ASD Table

Relevant External Links for SNORD115-13 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD115-13 Gene

mRNA expression in normal human tissues for SNORD115-13 Gene

genes like me logo Genes that share expression patterns with SNORD115-13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD115-13 Gene

Orthologs for SNORD115-13 Gene

Evolution for SNORD115-13 Gene

Gene Tree for SNORD115-13 (if available)
Gene Tree for SNORD115-13 (if available)

No data available for Orthologs for SNORD115-13 Gene

Paralogs for SNORD115-13 Gene

No data available for Paralogs for SNORD115-13 Gene

Variants for SNORD115-13 Gene

Sequence variations from dbSNP and Humsavar for SNORD115-13 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs7166875 -- 25,192,853(+) TCATG(C/T)GAGGG upstream-variant-2KB
rs7171267 -- 25,192,281(+) GGTTT(G/T)GGTCA upstream-variant-2KB
rs7172207 -- 25,192,763(+) GCATC(C/T)GGCAT upstream-variant-2KB
rs17115333 -- 25,192,221(+) AATGT(A/G)CCATC upstream-variant-2KB
rs17118821 -- 25,192,321(+) GCTAC(A/G)GTCCA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD115-13 Gene

Variant ID Type Subtype PubMed ID
nsv903721 CNV Gain 21882294
nsv456731 CNV Loss 19166990
nsv903722 CNV Gain+Loss 21882294
esv33464 CNV Gain 17666407
esv25915 CNV Gain+Loss 19812545
nsv517360 CNV Gain+Loss 19592680
dgv2286n71 CNV Loss 21882294
dgv447e199 CNV Deletion 23128226

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for SNORD115-13 Gene

Disorders for SNORD115-13 Gene

Relevant External Links for SNORD115-13

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD115-13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD115-13 Gene

Publications for SNORD115-13 Gene

  1. The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A. (PMID: 11726556) Runte M. … Buiting K. (Hum. Mol. Genet. 2001) 2 3 67
  2. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) CavaillAc J. … HA1ttenhofer A. (Proc. Natl. Acad. Sci. U.S.A. 2000) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. (PMID: 16357227) Kishore S. … Stamm S. (Science 2006) 3
  5. Exclusion of the C/D box snoRNA gene cluster HBII-52 from a major role in Prader-Willi syndrome. (PMID: 15565282) Runte M. … Buiting K. (Hum. Genet. 2005) 3

Products for SNORD115-13 Gene

Sources for SNORD115-13 Gene