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Aliases for SNORD114-30 Gene

Subcategory (RNA class) for SNORD114-30 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD114-30 Gene

  • Small Nucleolar RNA, C/D Box 114-30 2 3 5
  • 14q(II-30) 3

External Ids for SNORD114-30 Gene

ORGUL Members for SNORD114-30 Gene

Previous GeneCards Identifiers for SNORD114-30 Gene

  • GC14U900731
  • GC14P100554
  • GC14P100894
  • GC14P100979
  • GC14P101458
  • GC14P081641
  • GC14P101169
  • GC14P101337
  • GC14P102025
  • GC14P102274
  • GC14P102446

Summaries for SNORD114-30 Gene

GeneCards Summary for SNORD114-30 Gene

SNORD114-30 (Small Nucleolar RNA, C/D Box 114-30) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD114-30 Gene

Genomics for SNORD114-30 Gene

Regulatory Elements for SNORD114-30 Gene


Genomic Location for SNORD114-30 Gene

Chromosome:
14
Start:
100,991,919 bp from pter
End:
100,991,990 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for SNORD114-30 Gene

Genes around SNORD114-30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD114-30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD114-30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD114-30 Gene

Proteins for SNORD114-30 Gene

Post-translational modifications for SNORD114-30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD114-30 Gene

Domains & Families for SNORD114-30 Gene

Gene Families for SNORD114-30 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD114-30: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD114-30 Gene

Function for SNORD114-30 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD114-30 Gene

Localization for SNORD114-30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD114-30 Gene

Pathways & Interactions for SNORD114-30 Gene

SuperPathways for SNORD114-30 Gene

No Data Available

Interacting Proteins for SNORD114-30 Gene

Gene Ontology (GO) - Biological Process for SNORD114-30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD114-30 Gene

Drugs & Compounds for SNORD114-30 Gene

No Compound Related Data Available

Transcripts for SNORD114-30 Gene

mRNA/cDNA for SNORD114-30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD114-30 Gene

No ASD Table

Relevant External Links for SNORD114-30 Gene

GeneLoc Exon Structure for
SNORD114-30
ECgene alternative splicing isoforms for
SNORD114-30

Expression for SNORD114-30 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD114-30 Gene

Orthologs for SNORD114-30 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD114-30 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD113 35
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD113 35
  • 73 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD113 35
  • 64 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23600 35
  • 58 (a)
ManyToMany
Species where no ortholog for SNORD114-30 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD114-30 Gene

ENSEMBL:
Gene Tree for SNORD114-30 (if available)
TreeFam:
Gene Tree for SNORD114-30 (if available)

Paralogs for SNORD114-30 Gene

No data available for Paralogs for SNORD114-30 Gene

Variants for SNORD114-30 Gene

Sequence variations from dbSNP and Humsavar for SNORD114-30 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1002350517 -- 100,990,058(+) ACAAT(A/G)TAGAA upstream-variant-2KB
rs1002408468 -- 100,991,240(+) ATGTT(G/T)CCCAG upstream-variant-2KB
rs1002810004 -- 100,990,302(+) GTTAA(C/T)AAATA downstream-variant-500B, upstream-variant-2KB
rs1003019618 -- 100,992,464(+) CCACT(A/G)CACTT downstream-variant-500B, upstream-variant-2KB
rs1004634352 -- 100,991,112(+) TCACC(A/G)CAACC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD114-30 Gene

Variant ID Type Subtype PubMed ID
dgv1972n100 CNV loss 25217958
dgv1973n100 CNV gain+loss 25217958
dgv1974n100 CNV gain 25217958
dgv1975n100 CNV loss 25217958
dgv1976n100 CNV loss 25217958
nsv1055067 CNV gain 25217958
nsv565859 CNV gain 21841781

Relevant External Links for SNORD114-30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD114-30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD114-30 Gene

Disorders for SNORD114-30 Gene

Relevant External Links for SNORD114-30

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD114-30

No disorders were found for SNORD114-30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD114-30 Gene

Publications for SNORD114-30 Gene

  1. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. (PMID: 12045206) CavaillAc J. … Bachellerie J.P. (Hum. Mol. Genet. 2002) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD114-30 Gene

Sources for SNORD114-30 Gene

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