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Aliases for SNORD114-29 Gene

Subcategory (RNA class) for SNORD114-29 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD114-29 Gene

  • Small Nucleolar RNA, C/D Box 114-29 2 3
  • 14q(II-29) 3

External Ids for SNORD114-29 Gene

ORGUL Members for SNORD114-29 Gene

Previous GeneCards Identifiers for SNORD114-29 Gene

  • GC14U900720
  • GC14P100553
  • GC14P100893
  • GC14P100978
  • GC14P101456
  • GC14P081640

Summaries for SNORD114-29 Gene

GeneCards Summary for SNORD114-29 Gene

SNORD114-29 (Small Nucleolar RNA, C/D Box 114-29) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD114-29 Gene

Genomics for SNORD114-29 Gene

Regulatory Elements for SNORD114-29 Gene

Genomic Location for SNORD114-29 Gene

Start:
100,990,091 bp from pter
End:
100,990,160 bp from pter
Size:
70 bases
Orientation:
Plus strand

Genomic View for SNORD114-29 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD114-29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD114-29 Gene

Proteins for SNORD114-29 Gene

Post-translational modifications for SNORD114-29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD114-29 Gene

Domains for SNORD114-29 Gene

Gene Families for SNORD114-29 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD114-29: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD114-29 Gene

Function for SNORD114-29 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD114-29 Gene

Localization for SNORD114-29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD114-29 Gene

Pathways for SNORD114-29 Gene

SuperPathways for SNORD114-29 Gene

No Data Available

Interacting Proteins for SNORD114-29 Gene

Gene Ontology (GO) - Biological Process for SNORD114-29 Gene

None

No data available for Pathways by source for SNORD114-29 Gene

Transcripts for SNORD114-29 Gene

mRNA/cDNA for SNORD114-29 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD114-29 Gene

No ASD Table

Relevant External Links for SNORD114-29 Gene

GeneLoc Exon Structure for
SNORD114-29
ECgene alternative splicing isoforms for
SNORD114-29

Expression for SNORD114-29 Gene

mRNA expression in normal human tissues for SNORD114-29 Gene

genes like me logo Genes that share expressions with SNORD114-29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD114-29 Gene

Orthologs for SNORD114-29 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD114-29 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD113 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD113 36
  • 75 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25224 36
  • 66 (a)
OneToOne
Species with no ortholog for SNORD114-29:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD114-29 Gene

ENSEMBL:
Gene Tree for SNORD114-29 (if available)
TreeFam:
Gene Tree for SNORD114-29 (if available)

Paralogs for SNORD114-29 Gene

No data available for Paralogs for SNORD114-29 Gene

Variants for SNORD114-29 Gene

Sequence variations from dbSNP and Humsavar for SNORD114-29 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs147382412 -- 100,989,737(+) GTCAC(A/G)TGTTC upstream-variant-2KB
rs188390036 -- 100,989,815(+) TTTGG(A/G)TGGTT upstream-variant-2KB
rs193214112 -- 100,989,883(+) ATTTT(A/T)TCTAG upstream-variant-2KB
rs552186588 -- 100,989,874(+) AGATG(A/G)TGAAT upstream-variant-2KB
rs555227220 -- 100,989,730(+) CTTCA(C/T)GGTCA upstream-variant-2KB

Relevant External Links for SNORD114-29 Gene

HapMap Linkage Disequilibrium report
SNORD114-29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SNORD114-29 Gene

Disorders for SNORD114-29 Gene

No disorders were found for SNORD114-29 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD114-29 Gene

Publications for SNORD114-29 Gene

  1. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. (PMID: 12045206) CavaillAc J. … Bachellerie J.P. (Hum. Mol. Genet. 2002) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD114-29 Gene

Sources for SNORD114-29 Gene

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