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Aliases for SNORD113-4 Gene

Subcategory (RNA class) for SNORD113-4 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD113-4 Gene

  • Small Nucleolar RNA, C/D Box 113-4 2 3
  • 14q(I-4) 3

External Ids for SNORD113-4 Gene

ORGUL Members for SNORD113-4 Gene

Previous GeneCards Identifiers for SNORD113-4 Gene

  • GC14U900737
  • GC14P100473
  • GC14P100854
  • GC14P100946
  • GC14P101402
  • GC14P081584

Summaries for SNORD113-4 Gene

GeneCards Summary for SNORD113-4 Gene

SNORD113-4 (Small Nucleolar RNA, C/D Box 113-4) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD113-4 Gene

Genomics for SNORD113-4 Gene

Regulatory Elements for SNORD113-4 Gene

Genomic Location for SNORD113-4 Gene

Start:
100,936,491 bp from pter
End:
100,936,565 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for SNORD113-4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD113-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD113-4 Gene

Proteins for SNORD113-4 Gene

Post-translational modifications for SNORD113-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD113-4 Gene

Domains for SNORD113-4 Gene

Gene Families for SNORD113-4 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD113-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD113-4 Gene

Function for SNORD113-4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD113-4 Gene

Localization for SNORD113-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD113-4 Gene

Pathways for SNORD113-4 Gene

SuperPathways for SNORD113-4 Gene

No Data Available

Interacting Proteins for SNORD113-4 Gene

Gene Ontology (GO) - Biological Process for SNORD113-4 Gene

None

No data available for Pathways by source for SNORD113-4 Gene

Transcripts for SNORD113-4 Gene

mRNA/cDNA for SNORD113-4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORD113-4
    • Block miRNA regulation of SNORD113-4 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD113-4

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SNORD113-4 Gene

    No ASD Table

    Relevant External Links for SNORD113-4 Gene

    GeneLoc Exon Structure for
    SNORD113-4
    ECgene alternative splicing isoforms for
    SNORD113-4

    Expression for SNORD113-4 Gene

    mRNA expression in normal human tissues for SNORD113-4 Gene

    genes like me logo Genes that share expressions with SNORD113-4: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD113-4 Gene

    Orthologs for SNORD113-4 Gene

    This gene was present in the common ancestor of mammals.

    Orthologs for SNORD113-4 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia SNORD113 36
    • 100 (a)
    OneToOne
    cow
    (Bos Taurus)
    Mammalia SNORD113 36
    • 91 (a)
    OneToOne
    dog
    (Canis familiaris)
    Mammalia SNORD113 36
    • 97 (a)
    OneToOne
    mouse
    (Mus musculus)
    Mammalia AF357425 36
    • 71 (a)
    OneToMany
    Gm22962 36
    • 70 (a)
    OneToMany
    Species with no ortholog for SNORD113-4:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for SNORD113-4 Gene

    ENSEMBL:
    Gene Tree for SNORD113-4 (if available)
    TreeFam:
    Gene Tree for SNORD113-4 (if available)

    Paralogs for SNORD113-4 Gene

    No data available for Paralogs for SNORD113-4 Gene

    Variants for SNORD113-4 Gene

    Relevant External Links for SNORD113-4 Gene

    HapMap Linkage Disequilibrium report
    SNORD113-4

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SNORD113-4 Gene

    Disorders for SNORD113-4 Gene

    No disorders were found for SNORD113-4 Gene.

    No data available for UniProtKB/Swiss-Prot for SNORD113-4 Gene

    Publications for SNORD113-4 Gene

    1. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. (PMID: 12045206) CavaillAc J. … Bachellerie J.P. (Hum. Mol. Genet. 2002) 2 3
    2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

    Products for SNORD113-4 Gene

    Sources for SNORD113-4 Gene

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