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Aliases for SNORD11 Gene

Subcategory (RNA class) for SNORD11 Gene


Quality Score for this RNA gene is


Aliases for SNORD11 Gene

  • Small Nucleolar RNA, C/D Box 11 2 3 5
  • HBII-95 3

External Ids for SNORD11 Gene

ORGUL Members for SNORD11 Gene

Previous GeneCards Identifiers for SNORD11 Gene

  • GC02P202866
  • GC02P203157
  • GC02P195005

Summaries for SNORD11 Gene

GeneCards Summary for SNORD11 Gene

SNORD11 (Small Nucleolar RNA, C/D Box 11) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD11 Gene

Genomics for SNORD11 Gene

GeneHancer (GH) Regulatory Elements for SNORD11 Gene

Promoters and enhancers for SNORD11 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I202294 Enhancer 0.5 ENCODE 0.8 +2.2 2161 1.6 PAF1 JUND POLR2A JUN FOS NOP58 BMPR2 ALS2 SNORD11 GC02P202309
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD11 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD11 gene promoter:

Genomic Locations for SNORD11 Gene

Genomic Locations for SNORD11 Gene
84 bases
Plus strand

Genomic View for SNORD11 Gene

Genes around SNORD11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD11 Gene

Proteins for SNORD11 Gene

Post-translational modifications for SNORD11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD11 Gene

Domains & Families for SNORD11 Gene

Gene Families for SNORD11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD11: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD11 Gene

Function for SNORD11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD11 Gene

Localization for SNORD11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD11 Gene

Pathways & Interactions for SNORD11 Gene

SuperPathways for SNORD11 Gene

No Data Available

Interacting Proteins for SNORD11 Gene

Gene Ontology (GO) - Biological Process for SNORD11 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD11 Gene

Drugs & Compounds for SNORD11 Gene

No Compound Related Data Available

Transcripts for SNORD11 Gene

mRNA/cDNA for SNORD11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD11 Gene

No ASD Table

Relevant External Links for SNORD11 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD11 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD11 Gene:

genes like me logo Genes that share expression patterns with SNORD11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD11 Gene

Orthologs for SNORD11 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD11 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD11B 34
  • 100 (a)
(Canis familiaris)
Mammalia SNORD11B 34
  • 93 (a)
(Monodelphis domestica)
Mammalia SNORD11B 34
  • 89 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD11B 34
  • 88 (a)
(Danio rerio)
Actinopterygii SNORD11B 34 34
  • 51 (a)
Species where no ortholog for SNORD11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD11 Gene

Gene Tree for SNORD11 (if available)
Gene Tree for SNORD11 (if available)

Paralogs for SNORD11 Gene

No data available for Paralogs for SNORD11 Gene

Variants for SNORD11 Gene

Sequence variations from dbSNP and Humsavar for SNORD11 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000026848 -- 202,293,614(+) C/G downstream_transcript_variant
rs1001195179 -- 202,292,921(+) A/G upstream_transcript_variant
rs1001644879 -- 202,293,225(+) A/C/G downstream_transcript_variant
rs1002244389 -- 202,291,700(+) G/A/T upstream_transcript_variant
rs1002596970 -- 202,291,562(+) T/C upstream_transcript_variant

Additional Variant Information for SNORD11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD11 Gene

Disorders for SNORD11 Gene

Additional Disease Information for SNORD11

No disorders were found for SNORD11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD11 Gene

Publications for SNORD11 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 2 3 58
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD11 Gene

Sources for SNORD11 Gene

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