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Aliases for SNORD103B Gene

Subcategory (RNA class) for SNORD103B Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD103B Gene

  • Small Nucleolar RNA, C/D Box 103B 2 3
  • U103B 3

External Ids for SNORD103B Gene

ORGUL Members for SNORD103B Gene

Previous GeneCards Identifiers for SNORD103B Gene

  • GC01U901249
  • GC01M031409
  • GC01M031421

Summaries for SNORD103B Gene

GeneCards Summary for SNORD103B Gene

SNORD103B (Small Nucleolar RNA, C/D Box 103B) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD103B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD103B Gene

Genomics for SNORD103B Gene

GeneHancer (GH) Regulatory Elements for SNORD103B Gene

Promoters and enhancers for SNORD103B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I030974 Enhancer 0.9 Ensembl ENCODE 11.8 -26.5 -26531 1.9 SOX13 FOXA2 SAP130 ZNF384 CEBPG ZIC2 RARA TEAD3 GATAD2A SOX5 SNORD103B GC01M030974 SNORD103C GC01P030988 PUM1
GH01I031009 Enhancer 0.9 Ensembl ENCODE 11.6 -61.1 -61123 1 EBF1 BATF IRF4 ZNF121 ZNF316 NFATC1 ATF7 ZNF600 IKZF2 MAFK SNORD103B PUM1 GC01P030988 ENSG00000237329
GH01I030786 Enhancer 0.9 ENCODE dbSUPER 10.6 +162.4 162436 0.2 HDGF ELF3 SOX13 ZNF48 GATAD2A SOX5 TFE3 HMG20B STAT1 ELF1 MATN1 MATN1-AS1 SDC3 SNORD103B LOC400748 LOC105378621 GC01P030805
GH01I030977 Enhancer 0.7 ENCODE 11.8 -28.0 -28024 0.2 SIX4 CTCF ESRRA ZNF2 ZEB1 HIC1 CTBP1 GATA3 ZNF366 ZNF19 SNORD103B GC01M030974 SNORD103C GC01P030988 PUM1
GH01I031006 Enhancer 0.7 Ensembl ENCODE 11.6 -58.5 -58523 2.6 MEIS2 PRDM6 ZSCAN16 ZNF366 ZNF600 TRIM28 SNORD103B PUM1 GC01P030988 ENSG00000237329
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD103B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD103B Gene

Genomic Locations for SNORD103B Gene
chr1:30,949,118-30,949,205
(GRCh38/hg38)
Size:
88 bases
Orientation:
Minus strand
chr1:31,421,964-31,422,052
(GRCh37/hg19)

Genomic View for SNORD103B Gene

Genes around SNORD103B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD103B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD103B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD103B Gene

Proteins for SNORD103B Gene

Post-translational modifications for SNORD103B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD103B Gene

Domains & Families for SNORD103B Gene

Gene Families for SNORD103B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD103B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD103B Gene

Function for SNORD103B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD103B Gene

Localization for SNORD103B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD103B Gene

Pathways & Interactions for SNORD103B Gene

SuperPathways for SNORD103B Gene

No Data Available

Interacting Proteins for SNORD103B Gene

Gene Ontology (GO) - Biological Process for SNORD103B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD103B Gene

Drugs & Compounds for SNORD103B Gene

No Compound Related Data Available

Transcripts for SNORD103B Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD103B Gene

No ASD Table

Relevant External Links for SNORD103B Gene

GeneLoc Exon Structure for
SNORD103B
ECgene alternative splicing isoforms for
SNORD103B

No data available for mRNA/cDNA for SNORD103B Gene

Expression for SNORD103B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD103B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD103B Gene:

SNORD103B
genes like me logo Genes that share expression patterns with SNORD103B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD103B Gene

Orthologs for SNORD103B Gene

No data available for Orthologs and Evolution for SNORD103B Gene

Paralogs for SNORD103B Gene

No data available for Paralogs for SNORD103B Gene

Variants for SNORD103B Gene

Sequence variations from dbSNP and Humsavar for SNORD103B Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1003204825 -- 30,949,526(-) G/A upstream_transcript_variant
rs1003615361 -- 30,950,955(-) T/C upstream_transcript_variant
rs1005716106 -- 30,948,863(-) T/A downstream_transcript_variant
rs1006081089 -- 30,949,390(-) G/A upstream_transcript_variant
rs1007401771 -- 30,950,395(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD103B Gene

Variant ID Type Subtype PubMed ID
nsv470707 CNV gain 18288195
nsv545950 CNV loss 21841781
nsv945863 CNV duplication 23825009
nsv945864 CNV duplication 23825009
nsv947423 CNV duplication 23825009

Additional Variant Information for SNORD103B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD103B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD103B Gene

Disorders for SNORD103B Gene

Additional Disease Information for SNORD103B

No disorders were found for SNORD103B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD103B Gene

Publications for SNORD103B Gene

  1. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P … Cavaillé J (Nucleic acids research 2003) 2 3 58
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD103B Gene

Sources for SNORD103B Gene

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