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Aliases for SNORD101 Gene

Subcategory (RNA class) for SNORD101 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD101 Gene

  • Small Nucleolar RNA, C/D Box 101 2 3 5
  • C/D Box SnoRNA U101 3
  • U101 3

External Ids for SNORD101 Gene

ORGUL Members for SNORD101 Gene

Previous GeneCards Identifiers for SNORD101 Gene

  • GC06P133183
  • GC06P130711
  • GC06P133139
  • GC06P133140
  • GC06P133145
  • GC06P133151
  • GC06P133159

Summaries for SNORD101 Gene

GeneCards Summary for SNORD101 Gene

SNORD101 (Small Nucleolar RNA, C/D Box 101) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD101 Gene

Genomics for SNORD101 Gene

Regulatory Elements for SNORD101 Gene

Enhancers for SNORD101 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around SNORD101 on UCSC Golden Path with GeneCards custom track

Promoters for SNORD101 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for SNORD101 Gene

Chromosome:
6
Start:
132,815,307 bp from pter
End:
132,815,379 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for SNORD101 Gene

Genes around SNORD101 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD101 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD101 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD101 Gene

Proteins for SNORD101 Gene

Post-translational modifications for SNORD101 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD101 Gene

Domains & Families for SNORD101 Gene

Gene Families for SNORD101 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD101: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD101 Gene

Function for SNORD101 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD101 Gene

Localization for SNORD101 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD101 Gene

Pathways & Interactions for SNORD101 Gene

SuperPathways for SNORD101 Gene

No Data Available

Interacting Proteins for SNORD101 Gene

Gene Ontology (GO) - Biological Process for SNORD101 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD101 Gene

Drugs & Compounds for SNORD101 Gene

No Compound Related Data Available

Transcripts for SNORD101 Gene

mRNA/cDNA for SNORD101 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD101 Gene

No ASD Table

Relevant External Links for SNORD101 Gene

GeneLoc Exon Structure for
SNORD101
ECgene alternative splicing isoforms for
SNORD101

Expression for SNORD101 Gene

mRNA expression in normal human tissues for SNORD101 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD101 Gene:

SNORD101
genes like me logo Genes that share expression patterns with SNORD101: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD101 Gene

Orthologs for SNORD101 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD101 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORD101 35
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD101 35
  • 91 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD101 35
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23130 35
  • 84 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD101 35
  • 82 (a)
OneToMany
SNORD101 35
  • 82 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORD101 35
  • 99 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD101 35
  • 85 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD101 35
  • 80 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD101 35
  • 71 (a)
OneToOne
Species where no ortholog for SNORD101 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD101 Gene

ENSEMBL:
Gene Tree for SNORD101 (if available)
TreeFam:
Gene Tree for SNORD101 (if available)

Paralogs for SNORD101 Gene

No data available for Paralogs for SNORD101 Gene

Variants for SNORD101 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD101 Gene

Variant ID Type Subtype PubMed ID
dgv1830e212 CNV loss 25503493
nsv970166 CNV duplication 23825009

Relevant External Links for SNORD101 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD101

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD101 Gene

Disorders for SNORD101 Gene

Relevant External Links for SNORD101

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD101

No disorders were found for SNORD101 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD101 Gene

Publications for SNORD101 Gene

  1. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P. … CavaillAc J. (Nucleic Acids Res. 2003) 2 3 65
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 65

Products for SNORD101 Gene

Sources for SNORD101 Gene

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