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Aliases for SNORD10 Gene

Subcategory (RNA class) for SNORD10 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD10 Gene

  • Small Nucleolar RNA, C/D Box 10 2 3
  • MgU6-77 SnoRNA 3
  • MgU6-77 3

External Ids for SNORD10 Gene

ORGUL Members for SNORD10 Gene

Previous GeneCards Identifiers for SNORD10 Gene

  • GC17P007420
  • GC17P007480
  • GC17P007374

Summaries for SNORD10 Gene

GeneCards Summary for SNORD10 Gene

SNORD10 (Small Nucleolar RNA, C/D Box 10) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD10 include multiple myeloma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD10 Gene

Genomics for SNORD10 Gene

Regulatory Elements for SNORD10 Gene

Genomic Location for SNORD10 Gene

Start:
7,576,811 bp from pter
End:
7,576,958 bp from pter
Size:
148 bases
Orientation:
Plus strand

Genomic View for SNORD10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD10 Gene

Proteins for SNORD10 Gene

Post-translational modifications for SNORD10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD10 Gene

Domains for SNORD10 Gene

Gene Families for SNORD10 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD10: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD10 Gene

Function for SNORD10 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD10 Gene

Localization for SNORD10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD10 Gene

Pathways for SNORD10 Gene

SuperPathways for SNORD10 Gene

No Data Available

Interacting Proteins for SNORD10 Gene

Gene Ontology (GO) - Biological Process for SNORD10 Gene

None

No data available for Pathways by source for SNORD10 Gene

Transcripts for SNORD10 Gene

mRNA/cDNA for SNORD10 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD10 Gene

No ASD Table

Relevant External Links for SNORD10 Gene

GeneLoc Exon Structure for
SNORD10
ECgene alternative splicing isoforms for
SNORD10

Expression for SNORD10 Gene

mRNA expression in normal human tissues for SNORD10 Gene

SOURCE GeneReport for Unigene cluster for SNORD10 Gene Hs.742526

genes like me logo Genes that share expressions with SNORD10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD10 Gene

Orthologs for SNORD10 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD10 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD10 36
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD10 36
  • 79 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25835 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD10 36
  • 64 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD10 36
  • 52 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD10 36
  • 57 (a)
OneToOne
Species with no ortholog for SNORD10:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD10 Gene

ENSEMBL:
Gene Tree for SNORD10 (if available)
TreeFam:
Gene Tree for SNORD10 (if available)

Paralogs for SNORD10 Gene

No data available for Paralogs for SNORD10 Gene

Variants for SNORD10 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD10 Gene

Variant ID Type Subtype PubMed ID
esv2422288 CNV Deletion 17116639
nsv457659 CNV Loss 19166990
nsv907651 CNV Loss 21882294

Relevant External Links for SNORD10 Gene

HapMap Linkage Disequilibrium report
SNORD10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD10 Gene

Disorders for SNORD10 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for SNORD10 Gene including...

Search for SNORD10 Gene in MalaCards »
genes like me logo Genes that share disorders with SNORD10: view

No data available for UniProtKB/Swiss-Prot for SNORD10 Gene

Publications for SNORD10 Gene

  1. Modification of U6 spliceosomal RNA is guided by other small RNAs. (PMID: 9844635) Tycowski K.T. … Steitz J.A. (Mol. Cell 1998) 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3

Products for SNORD10 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORD10
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD10
    • Block miRNA regulation of SNORD10 using miScript Target Protectors

    Sources for SNORD10 Gene

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