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Aliases for SNORA9 Gene

Subcategory (RNA class) for SNORA9 Gene


Quality Score for this RNA gene is


Aliases for SNORA9 Gene

  • Small Nucleolar RNA, H/ACA Box 9 2 3
  • ACA9 SnoRNA 3
  • ACA9 3

External Ids for SNORA9 Gene

Previous GeneCards Identifiers for SNORA9 Gene

  • GC07M044991
  • GC07M045024

Summaries for SNORA9 Gene

GeneCards Summary for SNORA9 Gene

SNORA9 (Small Nucleolar RNA, H/ACA Box 9) is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for SNORA9 Gene - the ORGUL cluster for this gene includes several descriptions:

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

  • Small nucleolar RNA SNORA9: ACA9 is a member of the H/ACA class of snoRNA that guide the sites of modification of uridines to pseudouridines [1].

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA9 Gene

Genomics for SNORA9 Gene

Regulatory Elements for SNORA9 Gene

Genomic Location for SNORA9 Gene

44,985,378 bp from pter
44,985,510 bp from pter
133 bases
Minus strand

Genomic View for SNORA9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA9 Gene

ORGUL Member Location for SNORA9 Gene

ORGUL Member Location for SNORA9 gene

Proteins for SNORA9 Gene

Post-translational modifications for SNORA9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA9 Gene

Domains & Families for SNORA9 Gene

Gene Families for SNORA9 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA9: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA9 Gene

Function for SNORA9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA9 Gene

Localization for SNORA9 Gene

Subcellular locations from

Jensen Localization Image for SNORA9 Gene COMPARTMENTS Subcellular localization image for SNORA9 gene
Compartment Confidence
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORA9 Gene

Pathways & Interactions for SNORA9 Gene

SuperPathways for SNORA9 Gene

No Data Available

Interacting Proteins for SNORA9 Gene

Gene Ontology (GO) - Biological Process for SNORA9 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA9 Gene

Drugs & Compounds for SNORA9 Gene

No Compound Related Data Available

Transcripts for SNORA9 Gene

mRNA/cDNA for SNORA9 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA9 Gene

No ASD Table

Relevant External Links for SNORA9 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA9 Gene

SOURCE GeneReport for Unigene cluster for SNORA9 Gene Hs.744745

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA9 Gene

Orthologs for SNORA9 Gene

Evolution for SNORA9 Gene

Gene Tree for SNORA9 (if available)
Gene Tree for SNORA9 (if available)

No data available for Orthologs for SNORA9 Gene

Paralogs for SNORA9 Gene

No data available for Paralogs for SNORA9 Gene

Variants for SNORA9 Gene

Relevant External Links for SNORA9 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA9 Gene

Disorders for SNORA9 Gene

Relevant External Links for SNORA9

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SNORA9: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA9 Gene

Publications for SNORA9 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 1 2 67
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 1 2 67
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67
  4. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  5. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1

Products for SNORA9 Gene

Sources for SNORA9 Gene

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