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Aliases for SNORA81 Gene

Subcategory (RNA class) for SNORA81 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA81 Gene

  • Small Nucleolar RNA, H/ACA Box 81 2 3
  • HBI-61 SnoRNA 3
  • HBI-61 3

External Ids for SNORA81 Gene

ORGUL Members for SNORA81 Gene

Previous GeneCards Identifiers for SNORA81 Gene

  • GC03P187994
  • GC03P186507
  • GC03P186511
  • GC03P186519
  • GC03P186524
  • GC03P186530
  • GC03P186536
  • GC03P186545
  • GC03P186553
  • GC03P186571

Summaries for SNORA81 Gene

Entrez Gene Summary for SNORA81 Gene

  • Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA81, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

GeneCards Summary for SNORA81 Gene

SNORA81 (Small Nucleolar RNA, H/ACA Box 81) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Translation Factors.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA81 Gene

Genomics for SNORA81 Gene

Regulatory Elements for SNORA81 Gene

Genomic Location for SNORA81 Gene

Start:
186,786,675 bp from pter
End:
186,786,852 bp from pter
Size:
178 bases
Orientation:
Plus strand

Genomic View for SNORA81 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA81 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA81 Gene

Proteins for SNORA81 Gene

Post-translational modifications for SNORA81 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA81 Gene

Domains for SNORA81 Gene

Gene Families for SNORA81 Gene

HGNC:
  • SNORA :ncRNAs / Small nucleolar RNAs : H/ACA box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA81: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA81 Gene

Function for SNORA81 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA81 Gene

Localization for SNORA81 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA81 Gene

Pathways for SNORA81 Gene

SuperPathways for SNORA81 Gene

Superpath Contained pathways
1 Translation Factors
genes like me logo Genes that share pathways with SNORA81: view

Pathways by source for SNORA81 Gene

1 BioSystems pathway for SNORA81 Gene

Interacting Proteins for SNORA81 Gene

Gene Ontology (GO) - Biological Process for SNORA81 Gene

None

Transcripts for SNORA81 Gene

mRNA/cDNA for SNORA81 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA81 Gene

Small nucleolar RNA, H/ACA box 81:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA81 Gene

No ASD Table

Relevant External Links for SNORA81 Gene

GeneLoc Exon Structure for
SNORA81
ECgene alternative splicing isoforms for
SNORA81

Expression for SNORA81 Gene

mRNA expression in normal human tissues for SNORA81 Gene

SOURCE GeneReport for Unigene cluster for SNORA81 Gene Hs.688848

genes like me logo Genes that share expressions with SNORA81: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA81 Gene

Orthologs for SNORA81 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA81 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA81 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA81 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA81 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22519 36
  • 89 (a)
OneToMany
Snora81 16
Snora81 36
  • 90 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA81 36
  • 83 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA81 36
  • 80 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA81 36
  • 77 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORA81 36
  • 75 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORA81 36
  • 58 (a)
OneToOne
Species with no ortholog for SNORA81:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA81 Gene

ENSEMBL:
Gene Tree for SNORA81 (if available)
TreeFam:
Gene Tree for SNORA81 (if available)

Paralogs for SNORA81 Gene

No data available for Paralogs for SNORA81 Gene

Variants for SNORA81 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA81 Gene

Variant ID Type Subtype PubMed ID
dgv1541e1 CNV Complex 17122850
esv34136 CNV Loss 18971310

Relevant External Links for SNORA81 Gene

HapMap Linkage Disequilibrium report
SNORA81

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA81 Gene

Disorders for SNORA81 Gene

No disorders were found for SNORA81 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA81 Gene

Publications for SNORA81 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. A novel experimental approach for systematic identification of box H/ACA snoRNAs from eukaryotes. (PMID: 16361266) Gu A.D. … Qu L.H. (Nucleic Acids Res. 2005) 2 3
  3. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA81 Gene

Sources for SNORA81 Gene

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