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Aliases for SNORA7A Gene

Subcategory (RNA class) for SNORA7A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA7A Gene

  • Small Nucleolar RNA, H/ACA Box 7A 2 3
  • ACA7 Small Nucleolar RNA 3
  • ACA7 SnoRNA 3
  • ACA7 3

External Ids for SNORA7A Gene

Summaries for SNORA7A Gene

GeneCards Summary for SNORA7A Gene

SNORA7A (Small Nucleolar RNA, H/ACA Box 7A) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA7A Gene

Genomics for SNORA7A Gene

Genomic Location for SNORA7A Gene

Start:
12,840,312 bp from pter
End:
12,840,450 bp from pter
Size:
139 bases
Orientation:
Minus strand

Genomic View for SNORA7A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA7A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA7A Gene

No data available for Regulatory Elements for SNORA7A Gene

Proteins for SNORA7A Gene

Post-translational modifications for SNORA7A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA7A Gene

Domains for SNORA7A Gene

Gene Families for SNORA7A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA7A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA7A Gene

Function for SNORA7A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA7A Gene

Localization for SNORA7A Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA7A Gene

Pathways for SNORA7A Gene

SuperPathways for SNORA7A Gene

No Data Available

Interacting Proteins for SNORA7A Gene

Gene Ontology (GO) - Biological Process for SNORA7A Gene

None

No data available for Pathways by source for SNORA7A Gene

Transcripts for SNORA7A Gene

mRNA/cDNA for SNORA7A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA7A Gene

No ASD Table

Relevant External Links for SNORA7A Gene

GeneLoc Exon Structure for
SNORA7A
ECgene alternative splicing isoforms for
SNORA7A

Expression for SNORA7A Gene

mRNA expression in normal human tissues for SNORA7A Gene

genes like me logo Genes that share expressions with SNORA7A: view

Orthologs for SNORA7A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA7A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA7 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA7 37
  • 87 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA7 37
  • 87 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Snora7a 16
Snora7a 37
  • 86 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA7 37
  • 69 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA7 37
  • 70 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA7 37
  • 71 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA7 37
  • 70 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA7 37
  • 59 (a)
OneToMany
Species with no ortholog for SNORA7A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA7A Gene

ENSEMBL:
Gene Tree for SNORA7A (if available)
TreeFam:
Gene Tree for SNORA7A (if available)

Paralogs for SNORA7A Gene

No data available for Paralogs for SNORA7A Gene

Variants for SNORA7A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA7A Gene

Variant ID Type Subtype PubMed ID
dgv810e201 CNV Deletion 23290073
dgv850e199 CNV Deletion 23128226
nsv7351 OTHER Inversion 18451855
esv2751977 CNV Gain 17911159
nsv460435 CNV Loss 19166990

Relevant External Links for SNORA7A Gene

HapMap Linkage Disequilibrium report
SNORA7A

No data available for Sequence variations from dbSNP and Humsavar for SNORA7A Gene

Disorders for SNORA7A Gene

Relevant External Links for SNORA7A

Genetic Association Database (GAD)
SNORA7A
genes like me logo Genes that share disorders with SNORA7A: view

No data available for UniProtKB/Swiss-Prot for SNORA7A Gene

Publications for SNORA7A Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3
  5. TRIM65 regulates microRNA activity by ubiquitination of TNRC6. (PMID: 24778252) Li S. … Dorf M.E. (Proc. Natl. Acad. Sci. U.S.A. 2014) 3

Products for SNORA7A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA7A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA7A
    • Block miRNA regulation of SNORA7A using miScript Target Protectors

    Sources for SNORA7A Gene

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