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Aliases for SNORA79B Gene

Subcategory (RNA class) for SNORA79B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA79B Gene

  • Small Nucleolar RNA, H/ACA Box 79B 2 3 5

External Ids for SNORA79B Gene

ORGUL Members for SNORA79B Gene

Previous GeneCards Identifiers for SNORA79B Gene

  • GC00U936730
  • GC14U902039

Summaries for SNORA79B Gene

GeneCards Summary for SNORA79B Gene

SNORA79B (Small Nucleolar RNA, H/ACA Box 79B) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORA79B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA79B Gene

Genomics for SNORA79B Gene

Regulatory Elements for SNORA79B Gene

Enhancers for SNORA79B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H021092 2 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -778.1 -778101 18.3 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A SSRP1 METTL3 SUPT16H CHD8 METTL17 APEX1 PNP TEP1 ARHGEF40 TOX4 SNORA79B
GH14H020657 1.3 Ensembl ENCODE 10 -334.4 -334402 1.1 HDGF PKNOX1 SIN3A GLI4 ZNF2 GTF3C2 GLIS2 FOS KLF7 ZNF548 METTL3 SUPT16H METTL17 ENSG00000258515 CHD8 TEP1 ENSG00000258768 TTC5 PARP2 PIP4P1
GH14H020622 1.3 Ensembl ENCODE 10 -301.4 -301423 3.9 HNRNPUL1 SIN3A FEZF1 ZNF2 ZNF143 FOS ZC3H11A ZNF592 SSRP1 ZNF610 METTL3 SUPT16H CHD8 PARP2 METTL17 ENSG00000258515 TEP1 ENSG00000258768 OSGEP TOX4
GH14H020375 0.9 ENCODE 5.8 -55.1 -55138 6.7 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 RARA MIXL1 THAP11 MXD4 TEP1 RNA5SP382 CCNB1IP1 SNORD126 RNASE11 ENSG00000259001 SNORA79B ENSG00000254846
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORA79B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORA79B Gene

Genomic Locations for SNORA79B Gene
chr14:20,323,179-20,323,326
(GRCh38/hg38)
Size:
148 bases
Orientation:
Minus strand
chr14:20,791,338-20,791,485
(GRCh37/hg19)

Genomic View for SNORA79B Gene

Genes around SNORA79B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA79B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA79B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SNORA79B Gene

Proteins for SNORA79B Gene

Post-translational modifications for SNORA79B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA79B Gene

Domains & Families for SNORA79B Gene

Gene Families for SNORA79B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA79B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA79B Gene

Function for SNORA79B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA79B Gene

Localization for SNORA79B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA79B Gene

Pathways & Interactions for SNORA79B Gene

SuperPathways for SNORA79B Gene

No Data Available

Interacting Proteins for SNORA79B Gene

Gene Ontology (GO) - Biological Process for SNORA79B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA79B Gene

Drugs & Compounds for SNORA79B Gene

No Compound Related Data Available

Transcripts for SNORA79B Gene

mRNA/cDNA for SNORA79B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA79B Gene

No ASD Table

Relevant External Links for SNORA79B Gene

GeneLoc Exon Structure for
SNORA79B
ECgene alternative splicing isoforms for
SNORA79B

Expression for SNORA79B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA79B Gene

Orthologs for SNORA79B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA79B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA79 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA79 34 34 34 34 34 34 34 34 34 34 34 34
  • 91 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORA79 34
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA79 34 34
  • 79 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA79 34
  • 76 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORA79 34
  • 74 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA79 34
  • 47 (a)
OneToMany
Species where no ortholog for SNORA79B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA79B Gene

ENSEMBL:
Gene Tree for SNORA79B (if available)
TreeFam:
Gene Tree for SNORA79B (if available)

Paralogs for SNORA79B Gene

No data available for Paralogs for SNORA79B Gene

Variants for SNORA79B Gene

Relevant External Links for SNORA79B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA79B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA79B Gene

Disorders for SNORA79B Gene

Relevant External Links for SNORA79B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA79B

No disorders were found for SNORA79B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA79B Gene

Publications for SNORA79B Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 60

Products for SNORA79B Gene

Sources for SNORA79B Gene

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