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Aliases for SNORA72 Gene

Subcategory (RNA class) for SNORA72 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA72 Gene

  • Small Nucleolar RNA, H/ACA Box 72 2 3 5
  • RNA, U72 Small Nucleolar 2 3
  • U72 Small Nucleolar RNA 3
  • U72 SnoRNA 3
  • RNU72 3
  • U72 3

External Ids for SNORA72 Gene

ORGUL Members for SNORA72 Gene

Previous HGNC Symbols for SNORA72 Gene

  • RNU72

Previous GeneCards Identifiers for SNORA72 Gene

  • GC08M099126
  • GC08M094258
  • GC08M099054

Summaries for SNORA72 Gene

GeneCards Summary for SNORA72 Gene

SNORA72 (Small Nucleolar RNA, H/ACA Box 72) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA72 Gene

Genomics for SNORA72 Gene

Regulatory Elements for SNORA72 Gene

Genomic Location for SNORA72 Gene

Chromosome:
8
Start:
98,042,086 bp from pter
End:
98,042,217 bp from pter
Size:
132 bases
Orientation:
Minus strand

Genomic View for SNORA72 Gene

Genes around SNORA72 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA72 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA72 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA72 Gene

Proteins for SNORA72 Gene

Post-translational modifications for SNORA72 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA72 Gene

Domains & Families for SNORA72 Gene

Gene Families for SNORA72 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA72: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA72 Gene

Function for SNORA72 Gene

Animal Model Products

  • Taconic Biosciences Mouse Models for SNORA72

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA72 Gene

Localization for SNORA72 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SNORA72 Gene COMPARTMENTS Subcellular localization image for SNORA72 gene
Compartment Confidence
chloroplast 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORA72 Gene

Pathways & Interactions for SNORA72 Gene

SuperPathways for SNORA72 Gene

No Data Available

Interacting Proteins for SNORA72 Gene

Gene Ontology (GO) - Biological Process for SNORA72 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA72 Gene

Drugs & Compounds for SNORA72 Gene

No Compound Related Data Available

Transcripts for SNORA72 Gene

mRNA/cDNA for SNORA72 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA72 Gene

Small nucleolar RNA, H/ACA box 72:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA72 Gene

No ASD Table

Relevant External Links for SNORA72 Gene

GeneLoc Exon Structure for
SNORA72
ECgene alternative splicing isoforms for
SNORA72

Expression for SNORA72 Gene

SOURCE GeneReport for Unigene cluster for SNORA72 Gene Hs.684855

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA72 Gene

Orthologs for SNORA72 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA72 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORA72 36
  • 95 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA72 36
  • 89 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA72 36
  • 82 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA72 36
  • 77 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA72 36
  • 100 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA72 36
  • 74 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA72 36
  • 75 (a)
OneToMany
Species with no ortholog for SNORA72:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA72 Gene

ENSEMBL:
Gene Tree for SNORA72 (if available)
TreeFam:
Gene Tree for SNORA72 (if available)

Paralogs for SNORA72 Gene

No data available for Paralogs for SNORA72 Gene

Variants for SNORA72 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA72 Gene

Variant ID Type Subtype PubMed ID
esv2674440 CNV Deletion 23128226

Relevant External Links for SNORA72 Gene

HapMap Linkage Disequilibrium report
SNORA72

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA72 Gene

Disorders for SNORA72 Gene

Relevant External Links for SNORA72

Genetic Association Database (GAD)
SNORA72
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA72

No disorders were found for SNORA72 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA72 Gene

Publications for SNORA72 Gene

  1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 2 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J. … Bakin A. (J. Mol. Biol. 1997) 3
  4. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. (PMID: 9182768) Ganot P. … Kiss T. (Cell 1997) 3

Products for SNORA72 Gene

Sources for SNORA72 Gene

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