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Aliases for SNORA71A Gene

Subcategory (RNA class) for SNORA71A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA71A Gene

  • Small Nucleolar RNA, H/ACA Box 71A 2 3
  • RNA, U71A Small Nucleolar 2 3
  • RNU71A 3
  • U71a 3

External Ids for SNORA71A Gene

Previous Symbols for SNORA71A Gene

  • RNU71A

Summaries for SNORA71A Gene

GeneCards Summary for SNORA71A Gene

SNORA71A (Small Nucleolar RNA, H/ACA Box 71A) is an RNA Gene, and belongs to the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA71A Gene

Genomics for SNORA71A Gene

Genomic Location for SNORA71A Gene

Start:
38,427,306 bp from pter
End:
38,427,443 bp from pter
Size:
138 bases
Orientation:
Minus strand

Genomic View for SNORA71A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA71A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA71A Gene

Regulatory Elements for SNORA71A Gene

Proteins for SNORA71A Gene

Post-translational modifications for SNORA71A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA71A Gene

Domains for SNORA71A Gene

Gene Families for SNORA71A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA71A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA71A Gene

Function for SNORA71A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA71A Gene

Localization for SNORA71A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA71A Gene

Pathways for SNORA71A Gene

SuperPathways for SNORA71A Gene

No Data Available

Interacting Proteins for SNORA71A Gene

Gene Ontology (GO) - Biological Process for SNORA71A Gene

None

No data available for Pathways by source for SNORA71A Gene

Transcripts for SNORA71A Gene

mRNA/cDNA for SNORA71A Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA71A Gene

Small nucleolar RNA, H/ACA box 71A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA71A Gene

No ASD Table

Relevant External Links for SNORA71A Gene

GeneLoc Exon Structure for
SNORA71A
ECgene alternative splicing isoforms for
SNORA71A

Expression for SNORA71A Gene

mRNA expression in normal human tissues for SNORA71A Gene

SOURCE GeneReport for Unigene cluster for SNORA71A Gene Hs.681779

genes like me logo Genes that share expressions with SNORA71A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORA71A Gene

Orthologs for SNORA71A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA71A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA71 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA71 36
  • 82 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA71 36
  • 62 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24258 36
  • 65 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA71 36
  • 78 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA71 36
  • 81 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA71 36
  • 76 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA71 36
  • 72 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA71 36
  • 72 (a)
ManyToMany
SNORA71 36
  • 72 (a)
ManyToMany
Species with no ortholog for SNORA71A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA71A Gene

ENSEMBL:
Gene Tree for SNORA71A (if available)
TreeFam:
Gene Tree for SNORA71A (if available)

Paralogs for SNORA71A Gene

No data available for Paralogs for SNORA71A Gene

Variants for SNORA71A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA71A Gene

Variant ID Type Subtype PubMed ID
esv35121 CNV Gain 17911159
dgv1327e1 CNV Complex 17122850
nsv817893 CNV Gain 17921354
essv13086 CNV CNV 17122850
nsv509769 CNV Insertion 20534489
nsv9809 CNV Loss 18304495

Relevant External Links for SNORA71A Gene

HapMap Linkage Disequilibrium report
SNORA71A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORA71A Gene

Disorders for SNORA71A Gene

No disorders were found for SNORA71A Gene.

No data available for UniProtKB/Swiss-Prot for SNORA71A Gene

Publications for SNORA71A Gene

  1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 2 3
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA71A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA71A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA71A
    • Block miRNA regulation of SNORA71A using miScript Target Protectors

    Sources for SNORA71A Gene

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