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Aliases for SNORA70G Gene

Subcategory (RNA class) for SNORA70G Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA70G Gene

  • Small Nucleolar RNA, H/ACA Box 70G 2 3 5
  • Small Nucleolar RNA, H/ACA Box 70G (Retrotransposed) 2 3
  • U70G 3

External Ids for SNORA70G Gene

ORGUL Members for SNORA70G Gene

Previous GeneCards Identifiers for SNORA70G Gene

  • GC00U922396
  • GC12U901156
  • GC12M069022
  • GC12M066071

Summaries for SNORA70G Gene

GeneCards Summary for SNORA70G Gene

SNORA70G (Small Nucleolar RNA, H/ACA Box 70G) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORA70G Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA70G Gene

Genomics for SNORA70G Gene

GeneHancer (GH) Regulatory Elements for SNORA70G Gene

Promoters and enhancers for SNORA70G Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I068627 Enhancer 0.6 dbSUPER 550.8 -1.3 -1261 1.4 BCOR HDAC1 TEAD4 ZMYM3 CC2D1A ZNF121 CBX1 CBX5 NCOR1 ADNP GC12M068628 RPL10P12 SNORA70G NUP107 LINC02384 MDM1 RAP1B GC12M068645
GH12I068361 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.8 +262.0 262037 7 HDGF FOXA2 PKNOX1 ARNT ARID4B SIN3A IRF4 YY1 POLR2B ZNF143 NUP107 MDM1 LINC02384 RPL10P12 SNORA70G CPSF6 KRT8P39 RPL7P42 LOC100507250 RAP1B
GH12I068358 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +267.8 267830 2.2 ATF1 PKNOX1 FEZF1 ZBTB7B BRCA1 YY1 ZNF143 ATF7 RUNX3 RXRA MDM1 LINC02384 RAP1B LOC100507250 NUP107 RPL7P42 RPL10P12 SNORA70G ENSG00000256273 GC12P068422
GH12I068561 Enhancer 1.2 FANTOM5 ENCODE 10.9 +63.3 63337 4.3 PKNOX1 FEZF1 ZNF2 BRCA1 ZNF213 FOS ATF7 KLF13 TSHZ1 MAFF LINC02384 RPL10P12 SNORA70G MDM1 NUP107 MDM2 ENSG00000274459 RPSAP12
GH12I068559 Enhancer 1.2 FANTOM5 Ensembl ENCODE 10.9 +67.1 67050 2.5 HDAC1 USF1 JUN ZMYM3 CEBPG FOSL1 CTBP1 ZNF766 POLR2A FOS LINC02384 RPL10P12 SNORA70G MDM1 NUP107 RAP1B CPM RPSAP12 ENSG00000274459
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORA70G on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORA70G Gene

Genomic Locations for SNORA70G Gene
chr12:68,627,234-68,627,375
(GRCh38/hg38)
Size:
142 bases
Orientation:
Minus strand
chr12:69,021,014-69,021,155
(GRCh37/hg19)

Genomic View for SNORA70G Gene

Genes around SNORA70G on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA70G Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA70G Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70G Gene

Proteins for SNORA70G Gene

Post-translational modifications for SNORA70G Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70G Gene

Domains & Families for SNORA70G Gene

Gene Families for SNORA70G Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA70G: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA70G Gene

Function for SNORA70G Gene

Phenotypes From GWAS Catalog for SNORA70G Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA70G Gene

Localization for SNORA70G Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA70G Gene

Pathways & Interactions for SNORA70G Gene

SuperPathways for SNORA70G Gene

No Data Available

Interacting Proteins for SNORA70G Gene

Gene Ontology (GO) - Biological Process for SNORA70G Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA70G Gene

Drugs & Compounds for SNORA70G Gene

No Compound Related Data Available

Transcripts for SNORA70G Gene

mRNA/cDNA for SNORA70G Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA70G Gene

Small nucleolar RNA, H/ACA box 70G:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70G Gene

No ASD Table

Relevant External Links for SNORA70G Gene

GeneLoc Exon Structure for
SNORA70G
ECgene alternative splicing isoforms for
SNORA70G

Expression for SNORA70G Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORA70G Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA70G Gene:

SNORA70G

SOURCE GeneReport for Unigene cluster for SNORA70G Gene:

Hs.724530
genes like me logo Genes that share expression patterns with SNORA70G: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA70G Gene

Orthologs for SNORA70G Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70G Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA70 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA70 34
  • 75 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm26169 34
  • 73 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA70 34
  • 70 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA70 34
  • 63 (a)
ManyToMany
Species where no ortholog for SNORA70G was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70G Gene

ENSEMBL:
Gene Tree for SNORA70G (if available)
TreeFam:
Gene Tree for SNORA70G (if available)

Paralogs for SNORA70G Gene

No data available for Paralogs for SNORA70G Gene

Variants for SNORA70G Gene

Sequence variations from dbSNP and Humsavar for SNORA70G Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1003026394 -- 68,628,604(-) A/G upstream_transcript_variant
rs1003266944 -- 68,628,378(-) C/T upstream_transcript_variant
rs1003736765 -- 68,626,938(-) C/T downstream_transcript_variant
rs1004698486 -- 68,627,261(-) C/T non_coding_transcript_variant
rs1006774013 -- 68,626,880(-) A/G downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORA70G Gene

Variant ID Type Subtype PubMed ID
nsv522941 CNV gain 19592680
nsv952200 CNV duplication 24416366
nsv973087 CNV duplication 23825009

Additional Variant Information for SNORA70G Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA70G

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA70G Gene

Disorders for SNORA70G Gene

Additional Disease Information for SNORA70G

No disorders were found for SNORA70G Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA70G Gene

Publications for SNORA70G Gene

  1. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORA70G Gene

Sources for SNORA70G Gene

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