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Aliases for SNORA70F Gene

Subcategory (RNA class) for SNORA70F Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA70F Gene

  • Small Nucleolar RNA, H/ACA Box 70F 2 3 5
  • Small Nucleolar RNA, H/ACA Box 70F (Retrotransposed) 2 3
  • U70F 3

External Ids for SNORA70F Gene

ORGUL Members for SNORA70F Gene

Previous GeneCards Identifiers for SNORA70F Gene

  • GC00U922688
  • GC02U901714
  • GC02M165545
  • GC02M157426

Summaries for SNORA70F Gene

GeneCards Summary for SNORA70F Gene

SNORA70F (Small Nucleolar RNA, H/ACA Box 70F) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA70F Gene

Genomics for SNORA70F Gene

Genomic Location for SNORA70F Gene

Chromosome:
2
Start:
164,687,643 bp from pter
End:
164,687,777 bp from pter
Size:
135 bases
Orientation:
Minus strand

Genomic View for SNORA70F Gene

Genes around SNORA70F on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA70F Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA70F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70F Gene

No data available for Regulatory Elements for SNORA70F Gene

Proteins for SNORA70F Gene

Post-translational modifications for SNORA70F Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70F Gene

Domains & Families for SNORA70F Gene

Gene Families for SNORA70F Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA70F: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA70F Gene

Function for SNORA70F Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA70F Gene

Localization for SNORA70F Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA70F Gene

Pathways & Interactions for SNORA70F Gene

SuperPathways for SNORA70F Gene

No Data Available

Interacting Proteins for SNORA70F Gene

Gene Ontology (GO) - Biological Process for SNORA70F Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA70F Gene

Drugs & Compounds for SNORA70F Gene

No Compound Related Data Available

Transcripts for SNORA70F Gene

mRNA/cDNA for SNORA70F Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA70F Gene

Small nucleolar RNA, H/ACA box 70F:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70F Gene

No ASD Table

Relevant External Links for SNORA70F Gene

GeneLoc Exon Structure for
SNORA70F
ECgene alternative splicing isoforms for
SNORA70F

Expression for SNORA70F Gene

mRNA expression in normal human tissues for SNORA70F Gene

SOURCE GeneReport for Unigene cluster for SNORA70F Gene Hs.664357

genes like me logo Genes that share expression patterns with SNORA70F: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA70F Gene

Orthologs for SNORA70F Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70F Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia SNORA70 36
  • 70 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23233 36
  • 66 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA70 36
  • 69 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA70 36
  • 99 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORA70 36
  • 57 (a)
ManyToMany
Species with no ortholog for SNORA70F:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70F Gene

ENSEMBL:
Gene Tree for SNORA70F (if available)
TreeFam:
Gene Tree for SNORA70F (if available)

Paralogs for SNORA70F Gene

No data available for Paralogs for SNORA70F Gene

Variants for SNORA70F Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA70F Gene

Variant ID Type Subtype PubMed ID
nsv517875 CNV Loss 19592680

Relevant External Links for SNORA70F Gene

HapMap Linkage Disequilibrium report
SNORA70F

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA70F Gene

Disorders for SNORA70F Gene

Relevant External Links for SNORA70F

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA70F

No disorders were found for SNORA70F Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA70F Gene

Publications for SNORA70F Gene

  1. Sex-stratified genome-wide association studies including 270,000 individuals show sexual dimorphism in genetic loci for anthropometric traits. (PMID: 23754948) Randall J.C. … Heid I.M. (PLoS Genet. 2013) 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORA70F Gene

Sources for SNORA70F Gene

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