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Aliases for SNORA70F Gene

Subcategory (RNA class) for SNORA70F Gene


Quality Score for this RNA gene is


Aliases for SNORA70F Gene

  • Small Nucleolar RNA, H/ACA Box 70F 2 3 5
  • Small Nucleolar RNA, H/ACA Box 70F (Retrotransposed) 2 3
  • U70F 3

External Ids for SNORA70F Gene

ORGUL Members for SNORA70F Gene

Previous GeneCards Identifiers for SNORA70F Gene

  • GC00U922688
  • GC02U901714
  • GC02M165545
  • GC02M157426

Summaries for SNORA70F Gene

GeneCards Summary for SNORA70F Gene

SNORA70F (Small Nucleolar RNA, H/ACA Box 70F) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA70F Gene

Genomics for SNORA70F Gene

Regulatory Elements for SNORA70F Gene

Enhancers for SNORA70F Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F164709 0.9 ENCODE 11.9 -23.4 -23413 2.8 ELF3 TBP PKNOX1 ZFP64 THRB ZNF48 ZSCAN9 YY1 RARA GATA4 ENSG00000224331 SNORA70F COBLL1 SLC38A11 GC02M164689 GC02M164829
GH02F164661 0.7 ENCODE 11.5 +26.2 26212 0.2 PKNOX1 CEBPB DPF2 CEBPG EP300 RFX5 YY1 GATA3 CTBP1 ATF3 ENSG00000224331 SNORA70F GRB14
GH02F164837 1.3 Ensembl ENCODE 4.6 -153.4 -153406 6.8 PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 FOS SLC38A11 SNORA70F COBLL1 LOC101929633
GH02F164722 0.5 Ensembl ENCODE 11.2 -35.1 -35129 1.0 ENSG00000224331 SNORA70F COBLL1 GC02M164689 GC02M164829
GH02F164656 0.2 ENCODE 11.8 +30.6 30631 1.3 ENSG00000224331 SNORA70F GRB14 SLC38A11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORA70F on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA70F Gene

164,687,643 bp from pter
164,687,777 bp from pter
135 bases
Minus strand

Genomic View for SNORA70F Gene

Genes around SNORA70F on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA70F Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA70F Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70F Gene

Proteins for SNORA70F Gene

Post-translational modifications for SNORA70F Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70F Gene

Domains & Families for SNORA70F Gene

Gene Families for SNORA70F Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA70F: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA70F Gene

Function for SNORA70F Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA70F Gene

Localization for SNORA70F Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA70F Gene

Pathways & Interactions for SNORA70F Gene

SuperPathways for SNORA70F Gene

No Data Available

Interacting Proteins for SNORA70F Gene

Gene Ontology (GO) - Biological Process for SNORA70F Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA70F Gene

Transcripts for SNORA70F Gene

mRNA/cDNA for SNORA70F Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA70F Gene

Small nucleolar RNA, H/ACA box 70F:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70F Gene

No ASD Table

Relevant External Links for SNORA70F Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA70F Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA70F Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA70F Gene:


SOURCE GeneReport for Unigene cluster for SNORA70F Gene:

genes like me logo Genes that share expression patterns with SNORA70F: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA70F Gene

Orthologs for SNORA70F Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70F Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA70 35
  • 99 (a)
(Canis familiaris)
Mammalia SNORA70 35
  • 70 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA70 35
  • 69 (a)
(Mus musculus)
Mammalia Gm23233 35
  • 66 (a)
(Danio rerio)
Actinopterygii SNORA70 35
  • 57 (a)
Species where no ortholog for SNORA70F was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70F Gene

Gene Tree for SNORA70F (if available)
Gene Tree for SNORA70F (if available)

Paralogs for SNORA70F Gene

No data available for Paralogs for SNORA70F Gene

Variants for SNORA70F Gene

Sequence variations from dbSNP and Humsavar for SNORA70F Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10601676 -- 164,688,064(+) ATATG(-/AA)TATAT intron-variant, upstream-variant-2KB
rs10630427 -- 164,688,863(+) ATATC(-/AA)AATAT intron-variant, upstream-variant-2KB
rs112687878 -- 164,687,287(+) CCTCA(C/T)GAGTG intron-variant, downstream-variant-500B
rs113649613 -- 164,687,990(+) GTCCA(C/T)AAATA intron-variant, upstream-variant-2KB
rs114421489 -- 164,687,156(+) TAGTA(C/T)GCCTG intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNORA70F Gene

Variant ID Type Subtype PubMed ID
nsv1003734 CNV gain 25217958
nsv517875 CNV loss 19592680
nsv583555 CNV gain 21841781
nsv961523 CNV duplication 23825009

Relevant External Links for SNORA70F Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA70F Gene

Disorders for SNORA70F Gene

Relevant External Links for SNORA70F

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA70F Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA70F Gene

Publications for SNORA70F Gene

  1. Sex-stratified genome-wide association studies including 270,000 individuals show sexual dimorphism in genetic loci for anthropometric traits. (PMID: 23754948) Randall J.C. … Heid I.M. (PLoS Genet. 2013) 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORA70F Gene

Sources for SNORA70F Gene

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