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Aliases for SNORA70 Gene

Subcategory (RNA class) for SNORA70 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORA70 Gene

  • Small Nucleolar RNA, H/ACA Box 70 2 3 5
  • RNA, U70 Small Nucleolar 2 3
  • U70 Small Nucleolar RNA 3
  • U70 SnoRNA 3
  • DXS648E 3
  • RNU70 3
  • U70 3

External Ids for SNORA70 Gene

Previous HGNC Symbols for SNORA70 Gene

  • RNU70

Previous GeneCards Identifiers for SNORA70 Gene

  • GC0XP153281
  • GC0XP153628

Summaries for SNORA70 Gene

GeneCards Summary for SNORA70 Gene

SNORA70 (Small Nucleolar RNA, H/ACA Box 70) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Viral mRNA Translation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA70 Gene

Genomics for SNORA70 Gene

Regulatory Elements for SNORA70 Gene

Enhancers for SNORA70 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SNORA70 on UCSC Golden Path with GeneCards custom track

Promoters for SNORA70 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SNORA70 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the SNORA70 gene promoter:

Genomic Location for SNORA70 Gene

Chromosome:
X
Start:
154,400,281 bp from pter
End:
154,400,415 bp from pter
Size:
135 bases
Orientation:
Plus strand

Genomic View for SNORA70 Gene

Genes around SNORA70 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA70 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70 Gene

Proteins for SNORA70 Gene

Post-translational modifications for SNORA70 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70 Gene

Domains & Families for SNORA70 Gene

Gene Families for SNORA70 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA70: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA70 Gene

Function for SNORA70 Gene

miRNA for SNORA70 Gene

miRTarBase miRNAs that target SNORA70

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SNORA70 Gene

Localization for SNORA70 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SNORA70 Gene COMPARTMENTS Subcellular localization image for SNORA70 gene
Compartment Confidence
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORA70 Gene

Pathways & Interactions for SNORA70 Gene

SuperPathways for SNORA70 Gene

Superpath Contained pathways
1 Viral mRNA Translation
genes like me logo Genes that share pathways with SNORA70: view

Pathways by source for SNORA70 Gene

1 BioSystems pathway for SNORA70 Gene

Interacting Proteins for SNORA70 Gene

Gene Ontology (GO) - Biological Process for SNORA70 Gene

None

No data available for SIGNOR curated interactions for SNORA70 Gene

Drugs & Compounds for SNORA70 Gene

No Compound Related Data Available

Transcripts for SNORA70 Gene

mRNA/cDNA for SNORA70 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70 Gene

No ASD Table

Relevant External Links for SNORA70 Gene

GeneLoc Exon Structure for
SNORA70
ECgene alternative splicing isoforms for
SNORA70

Expression for SNORA70 Gene

mRNA expression in normal human tissues for SNORA70 Gene

genes like me logo Genes that share expression patterns with SNORA70: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA70 Gene

Orthologs for SNORA70 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia SNORA70 36
  • 76 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24787 36
  • 71 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA70 36
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA70 36
  • 74 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA70 36
  • 62 (a)
ManyToMany
Species with no ortholog for SNORA70:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70 Gene

ENSEMBL:
Gene Tree for SNORA70 (if available)
TreeFam:
Gene Tree for SNORA70 (if available)

Paralogs for SNORA70 Gene

No data available for Paralogs for SNORA70 Gene

Variants for SNORA70 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA70 Gene

Variant ID Type Subtype PubMed ID
esv33199 CNV Gain+Loss 17666407
esv33784 CNV Gain+Loss 17666407
nsv519042 CNV Gain 19592680
nsv7468 OTHER Inversion 18451855
nsv220 OTHER Inversion 15895083

Relevant External Links for SNORA70 Gene

HapMap Linkage Disequilibrium report
SNORA70

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA70 Gene

Disorders for SNORA70 Gene

Relevant External Links for SNORA70

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA70

No disorders were found for SNORA70 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA70 Gene

Publications for SNORA70 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3 67
  2. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Long-range sequence analysis in Xq28: thirteen known and six candidate genes in 219.4 kb of high GC DNA between the RCP/GCP and G6PD loci. (PMID: 8733135) Chen E.Y. … D'Urso M. (Hum. Mol. Genet. 1996) 3

Products for SNORA70 Gene

Sources for SNORA70 Gene

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