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Aliases for SNORA70 Gene

Subcategory (RNA class) for SNORA70 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORA70 Gene

  • Small Nucleolar RNA, H/ACA Box 70 2 3
  • RNA, U70 Small Nucleolar 2 3
  • U70 Small Nucleolar RNA 3
  • U70 SnoRNA 3
  • DXS648E 3
  • RNU70 3
  • U70 3

External Ids for SNORA70 Gene

Previous Symbols for SNORA70 Gene

  • RNU70

Summaries for SNORA70 Gene

GeneCards Summary for SNORA70 Gene

SNORA70 (Small Nucleolar RNA, H/ACA Box 70) is a RNA Gene, and belongs to snoRNA RNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA70 Gene

Genomics for SNORA70 Gene

Genomic Location for SNORA70 Gene

Start:
154,400,281 bp from pter
End:
154,400,415 bp from pter
Size:
135 bases
Orientation:
Plus strand

Genomic View for SNORA70 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70 Gene

Regulatory Elements for SNORA70 Gene

Transcription factor binding sites by QIAGEN in the SNORA70 gene promoter:

Proteins for SNORA70 Gene

Post-translational modifications for SNORA70 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70 Gene

Domains for SNORA70 Gene

Gene Families for SNORA70 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA70: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA70 Gene

Function for SNORA70 Gene

miRNA for SNORA70 Gene

miRTarBase miRNAs that target SNORA70

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SNORA70 Gene

Localization for SNORA70 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA70 Gene

Pathways for SNORA70 Gene

genes like me logo Genes that share pathways with SNORA70: view

Pathways by source for SNORA70 Gene

1 BioSystems pathway for SNORA70 Gene

Interacting Proteins for SNORA70 Gene

Gene Ontology (GO) - Biological Process for SNORA70 Gene

None

Transcripts for SNORA70 Gene

mRNA/cDNA for SNORA70 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70 Gene

No ASD Table

Relevant External Links for SNORA70 Gene

GeneLoc Exon Structure for
SNORA70
ECgene alternative splicing isoforms for
SNORA70

Expression for SNORA70 Gene

mRNA expression in normal human tissues for SNORA70 Gene

genes like me logo Genes that share expressions with SNORA70: view

Orthologs for SNORA70 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA70 37
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA70 37
  • 76 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24787 37
  • 71 (a)
ManyToMany
Snora70 16
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA70 37
  • 74 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA70 37
  • 62 (a)
ManyToMany
Species with no ortholog for SNORA70:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70 Gene

ENSEMBL:
Gene Tree for SNORA70 (if available)
TreeFam:
Gene Tree for SNORA70 (if available)

Paralogs for SNORA70 Gene

No data available for Paralogs for SNORA70 Gene

Variants for SNORA70 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA70 Gene

Variant ID Type Subtype PubMed ID
esv33199 CNV Gain+Loss 17666407
esv33784 CNV Gain+Loss 17666407
nsv519042 CNV Gain 19592680
nsv7468 OTHER Inversion 18451855
nsv220 OTHER Inversion 15895083

Relevant External Links for SNORA70 Gene

HapMap Linkage Disequilibrium report
SNORA70

No data available for Sequence variations from dbSNP and Humsavar for SNORA70 Gene

Disorders for SNORA70 Gene

No disorders were found for SNORA70 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA70 Gene

Publications for SNORA70 Gene

  1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 2 3
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Long-range sequence analysis in Xq28: thirteen known and six candidate genes in 219.4 kb of high GC DNA between the RCP/GCP and G6PD loci. (PMID: 8733135) Chen E.Y. … D'Urso M. (Hum. Mol. Genet. 1996) 3

Products for SNORA70 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA70
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA70
    • Block miRNA regulation of SNORA70 using miScript Target Protectors

    Sources for SNORA70 Gene

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