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Aliases for SNORA69 Gene

Subcategory (RNA class) for SNORA69 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA69 Gene

  • Small Nucleolar RNA, H/ACA Box 69 2 3
  • RNA, U69 Small Nucleolar 2
  • U69a Small Nucleolar RNA 3
  • U69 Small Nucleolar RNA 3
  • U69 SnoRNA 3
  • RNU69 3
  • U69A 3
  • U69 3

External Ids for SNORA69 Gene

Previous Symbols for SNORA69 Gene

  • RNU69

Summaries for SNORA69 Gene

Entrez Gene Summary for SNORA69 Gene

  • This gene encodes a member of the family of box ACA small nucleolar RNAs, characterized by a consensus ACA motif positioned 3 nucleotides from the 3' end of the RNAs and a double-hairpin structure. The box ACA small nucleolar RNAs may play a role in rRNA maturation. This gene is co-transcribed with the ribosomal protein L39 gene. [provided by RefSeq, Oct 2009]

GeneCards Summary for SNORA69 Gene

SNORA69 (Small Nucleolar RNA, H/ACA Box 69) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA69 Gene

Genomics for SNORA69 Gene

Genomic Location for SNORA69 Gene

Start:
119,787,353 bp from pter
End:
119,787,484 bp from pter
Size:
132 bases
Orientation:
Minus strand

Genomic View for SNORA69 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA69 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA69 Gene

Regulatory Elements for SNORA69 Gene

Proteins for SNORA69 Gene

Post-translational modifications for SNORA69 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA69 Gene

Domains for SNORA69 Gene

Gene Families for SNORA69 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA69: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA69 Gene

Function for SNORA69 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA69 Gene

Localization for SNORA69 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA69 Gene

Pathways for SNORA69 Gene

SuperPathways for SNORA69 Gene

No Data Available

Interacting Proteins for SNORA69 Gene

Gene Ontology (GO) - Biological Process for SNORA69 Gene

None

No data available for Pathways by source for SNORA69 Gene

Transcripts for SNORA69 Gene

mRNA/cDNA for SNORA69 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA69 Gene

Small nucleolar RNA, H/ACA box 69:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA69 Gene

No ASD Table

Relevant External Links for SNORA69 Gene

GeneLoc Exon Structure for
SNORA69
ECgene alternative splicing isoforms for
SNORA69

Expression for SNORA69 Gene

mRNA expression in normal human tissues for SNORA69 Gene

SOURCE GeneReport for Unigene cluster for SNORA69 Gene Hs.675255

genes like me logo Genes that share expressions with SNORA69: view

Orthologs for SNORA69 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA69 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA69 37
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22784 37
  • 77 (a)
ManyToMany
Snora69 16
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA69 37
  • 76 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA69 37
  • 73 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA69 37
  • 63 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA69 37
  • 57 (a)
OneToMany
Species with no ortholog for SNORA69:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA69 Gene

ENSEMBL:
Gene Tree for SNORA69 (if available)
TreeFam:
Gene Tree for SNORA69 (if available)

Paralogs for SNORA69 Gene

No data available for Paralogs for SNORA69 Gene

Variants for SNORA69 Gene

Relevant External Links for SNORA69 Gene

HapMap Linkage Disequilibrium report
SNORA69

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SNORA69 Gene

Disorders for SNORA69 Gene

No disorders were found for SNORA69 Gene.

No data available for UniProtKB/Swiss-Prot for SNORA69 Gene

Publications for SNORA69 Gene

  1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 2 3
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  3. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  5. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. (PMID: 9182768) Ganot P. … Kiss T. (Cell 1997) 3

Products for SNORA69 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA69
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA69
    • Block miRNA regulation of SNORA69 using miScript Target Protectors

    Sources for SNORA69 Gene

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