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Aliases for SNORA66 Gene

Subcategory (RNA class) for SNORA66 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA66 Gene

  • Small Nucleolar RNA, H/ACA Box 66 2 3
  • RNA, U66 Small Nucleolar 2 3
  • RNU66 3
  • U66 3

External Ids for SNORA66 Gene

ORGUL Members for SNORA66 Gene

Previous HGNC Symbols for SNORA66 Gene

  • RNU66

Previous GeneCards Identifiers for SNORA66 Gene

  • GC01P093078
  • GC01P093306
  • GC01P091427

Summaries for SNORA66 Gene

Entrez Gene Summary for SNORA66 Gene

  • This gene encodes a non-coding RNA that functions in the biogenesis of other small nuclear RNAs. This RNA is found in the nucleolus, where it may be involved in the pseudouridylation of 18S ribosomal RNA. This RNA is found associated with the GAR1 protein. [provided by RefSeq, Apr 2009]

GeneCards Summary for SNORA66 Gene

SNORA66 (Small Nucleolar RNA, H/ACA Box 66) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA66 Gene

Genomics for SNORA66 Gene

Regulatory Elements for SNORA66 Gene

Genomic Location for SNORA66 Gene

Chromosome:
1
Start:
92,840,719 bp from pter
End:
92,840,851 bp from pter
Size:
133 bases
Orientation:
Plus strand

Genomic View for SNORA66 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA66 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA66 Gene

Proteins for SNORA66 Gene

Post-translational modifications for SNORA66 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA66 Gene

Domains & Families for SNORA66 Gene

Gene Families for SNORA66 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA66: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA66 Gene

Function for SNORA66 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA66 Gene

Localization for SNORA66 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SNORA66 Gene COMPARTMENTS Subcellular localization image for SNORA66 gene
Compartment Confidence
chloroplast 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORA66 Gene

Pathways & Interactions for SNORA66 Gene

SuperPathways for SNORA66 Gene

No Data Available

Interacting Proteins for SNORA66 Gene

Gene Ontology (GO) - Biological Process for SNORA66 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA66 Gene

Drugs & Compounds for SNORA66 Gene

No Compound Related Data Available

Transcripts for SNORA66 Gene

mRNA/cDNA for SNORA66 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA66 Gene

No ASD Table

Relevant External Links for SNORA66 Gene

GeneLoc Exon Structure for
SNORA66
ECgene alternative splicing isoforms for
SNORA66

Expression for SNORA66 Gene

mRNA expression in normal human tissues for SNORA66 Gene

genes like me logo Genes that share expression patterns with SNORA66: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA66 Gene

Orthologs for SNORA66 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA66 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORA66 36
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA66 36
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA66 36
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26387 36
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA66 36
  • 70 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia SNORA66 36
  • 100 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORA66 36
  • 52 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORA66 36
  • 72 (a)
OneToMany
Species with no ortholog for SNORA66:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA66 Gene

ENSEMBL:
Gene Tree for SNORA66 (if available)
TreeFam:
Gene Tree for SNORA66 (if available)

Paralogs for SNORA66 Gene

No data available for Paralogs for SNORA66 Gene

Variants for SNORA66 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA66 Gene

Variant ID Type Subtype PubMed ID
esv2714684 CNV Deletion 23290073
nsv508393 CNV Loss 20534489

Relevant External Links for SNORA66 Gene

HapMap Linkage Disequilibrium report
SNORA66

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA66 Gene

Disorders for SNORA66 Gene

Relevant External Links for SNORA66

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA66
genes like me logo Genes that share disorders with SNORA66: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA66 Gene

Publications for SNORA66 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 67
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 67
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 67
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67

Products for SNORA66 Gene

Sources for SNORA66 Gene

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