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Aliases for SNORA64 Gene

Subcategory (RNA class) for SNORA64 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA64 Gene

  • Small Nucleolar RNA, H/ACA Box 64 2 3 5
  • RNA, U64 Small Nucleolar 2 3
  • U64 Small Nucleolar RNA 3
  • U64 SnoRNA 3
  • RNU64 3
  • U64 3

External Ids for SNORA64 Gene

Previous HGNC Symbols for SNORA64 Gene

  • RNU64

Previous GeneCards Identifiers for SNORA64 Gene

  • GC16M001958
  • GC16M002016
  • GC16M002018
  • GC16M002022
  • GC16M002024
  • GC16M002026
  • GC16M002035
  • GC16M002040
  • GC16M001970
  • GC16M001974

Summaries for SNORA64 Gene

GeneCards Summary for SNORA64 Gene

SNORA64 (Small Nucleolar RNA, H/ACA Box 64) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Viral mRNA Translation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA64 Gene

Genomics for SNORA64 Gene

Regulatory Elements for SNORA64 Gene

Enhancers for SNORA64 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SNORA64 on UCSC Golden Path with GeneCards custom track

Promoters for SNORA64 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SNORA64 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA64 Gene

Chromosome:
16
Start:
1,962,973 bp from pter
End:
1,963,106 bp from pter
Size:
134 bases
Orientation:
Minus strand

Genomic View for SNORA64 Gene

Genes around SNORA64 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA64 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA64 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA64 Gene

Proteins for SNORA64 Gene

Post-translational modifications for SNORA64 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA64 Gene

Domains & Families for SNORA64 Gene

Gene Families for SNORA64 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA64: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA64 Gene

Function for SNORA64 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA64 Gene

Localization for SNORA64 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA64 Gene

Pathways & Interactions for SNORA64 Gene

SuperPathways for SNORA64 Gene

Superpath Contained pathways
1 Viral mRNA Translation
genes like me logo Genes that share pathways with SNORA64: view

Pathways by source for SNORA64 Gene

1 BioSystems pathway for SNORA64 Gene

Interacting Proteins for SNORA64 Gene

Gene Ontology (GO) - Biological Process for SNORA64 Gene

None

No data available for SIGNOR curated interactions for SNORA64 Gene

Drugs & Compounds for SNORA64 Gene

No Compound Related Data Available

Transcripts for SNORA64 Gene

mRNA/cDNA for SNORA64 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA64 Gene

No ASD Table

Relevant External Links for SNORA64 Gene

GeneLoc Exon Structure for
SNORA64
ECgene alternative splicing isoforms for
SNORA64

Expression for SNORA64 Gene

mRNA expression in normal human tissues for SNORA64 Gene

SOURCE GeneReport for Unigene cluster for SNORA64 Gene Hs.745496

genes like me logo Genes that share expression patterns with SNORA64: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORA64 Gene

Orthologs for SNORA64 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA64 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA64 36
  • 99 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORA64 36
  • 57 (a)
OneToMany
Species with no ortholog for SNORA64:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA64 Gene

ENSEMBL:
Gene Tree for SNORA64 (if available)
TreeFam:
Gene Tree for SNORA64 (if available)

Paralogs for SNORA64 Gene

No data available for Paralogs for SNORA64 Gene

Variants for SNORA64 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA64 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
dgv2540n71 CNV Loss 21882294
dgv2544n71 CNV Loss 21882294
dgv2545n71 CNV Loss 21882294
nsv833120 CNV Loss 17160897
nsv905048 CNV Loss 21882294
dgv2546n71 CNV Loss 21882294
dgv2547n71 CNV Loss 21882294
dgv2548n71 CNV Gain 21882294
dgv2549n71 CNV Loss 21882294
dgv2550n71 CNV Loss 21882294
nsv905061 CNV Loss 21882294
dgv2551n71 CNV Loss 21882294
nsv471070 CNV Gain 18288195
nsv905070 CNV Gain+Loss 21882294
dgv2552n71 CNV Gain+Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SNORA64 Gene

Disorders for SNORA64 Gene

Relevant External Links for SNORA64

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA64

No disorders were found for SNORA64 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA64 Gene

Publications for SNORA64 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 67
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P. … Kiss T. (Genes Dev. 1997) 3

Products for SNORA64 Gene

Sources for SNORA64 Gene

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