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Aliases for SNORA63C Gene

Subcategory (RNA class) for SNORA63C Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA63C Gene

  • Small Nucleolar RNA, H/ACA Box 63C 2 3 5

External Ids for SNORA63C Gene

ORGUL Members for SNORA63C Gene

Previous GeneCards Identifiers for SNORA63C Gene

  • GC00U936771
  • GC01U905720

Summaries for SNORA63C Gene

GeneCards Summary for SNORA63C Gene

SNORA63C (Small Nucleolar RNA, H/ACA Box 63C) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORA63C Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA63C Gene

Genomics for SNORA63C Gene

Regulatory Elements for SNORA63C Gene

Enhancers for SNORA63C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H036370 2.1 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +42.5 42498 10 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A YBX1 FEZF1 DMAP1 CSF3R STK40 AGO3 LSM10 RNU4-27P SNORA63C OSCP1 ENSG00000223944 EVA1B LOC105378647
GH01H036299 1.6 Ensembl ENCODE dbSUPER 11.1 +114.8 114795 8 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 AGO3 STK40 SNORA63C OSCP1 MAP7D1 TRAPPC3 LSM10 RNU4-27P LOC100128093 TEKT2
GH01H036484 1.6 FANTOM5 Ensembl ENCODE 10.3 -68.5 -68459 4 HDGF FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 CSF3R OSCP1 MRPS15 SNORA63C THRAP3 STK40 MAP7D1 SH3D21 LSM10 GC01M036518
GH01H036385 1.4 ENCODE dbSUPER 11.5 +30.4 30445 7 MLX FEZF1 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZC3H11A MEF2D THRAP3 EVA1B LOC105378647 TRAPPC3 AGO3 ENSG00000116883 SH3D21 STK40 SNORA63C OSCP1
GH01H036339 1.3 Ensembl ENCODE dbSUPER 12.3 +76.1 76127 6 BCOR CTCF RB1 JUN ARID4B ZIC2 RAD21 HIC1 ZNF316 POLR2A SH3D21 SNORA63C OSCP1 LSM10 RNU4-27P MAP7D1 TRAPPC3 ENSG00000116883 PIR56403 PIR49451
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORA63C on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA63C Gene

Chromosome:
1
Start:
36,418,450 bp from pter
End:
36,418,578 bp from pter
Size:
129 bases
Orientation:
Minus strand

Genomic View for SNORA63C Gene

Genes around SNORA63C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA63C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA63C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SNORA63C Gene

Proteins for SNORA63C Gene

Post-translational modifications for SNORA63C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA63C Gene

Domains & Families for SNORA63C Gene

Gene Families for SNORA63C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA63C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA63C Gene

Function for SNORA63C Gene

Phenotypes From GWAS Catalog for SNORA63C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA63C Gene

Localization for SNORA63C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA63C Gene

Pathways & Interactions for SNORA63C Gene

SuperPathways for SNORA63C Gene

No Data Available

Interacting Proteins for SNORA63C Gene

Gene Ontology (GO) - Biological Process for SNORA63C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORA63C Gene

Drugs & Compounds for SNORA63C Gene

No Compound Related Data Available

Transcripts for SNORA63C Gene

mRNA/cDNA for SNORA63C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA63C Gene

No ASD Table

Relevant External Links for SNORA63C Gene

GeneLoc Exon Structure for
SNORA63C
ECgene alternative splicing isoforms for
SNORA63C

Expression for SNORA63C Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA63C Gene

Orthologs for SNORA63C Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA63C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA63 34
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA63 34
  • 74 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA63 34 34 34
  • 62 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA63 34
  • 55 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA63 34
  • 73 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA63 34
  • 74 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA63 34 34 34 34 34
  • 65 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORA63 34
  • 54 (a)
OneToMany
Species where no ortholog for SNORA63C was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA63C Gene

ENSEMBL:
Gene Tree for SNORA63C (if available)
TreeFam:
Gene Tree for SNORA63C (if available)

Paralogs for SNORA63C Gene

No data available for Paralogs for SNORA63C Gene

Variants for SNORA63C Gene

Relevant External Links for SNORA63C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA63C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA63C Gene

Disorders for SNORA63C Gene

Relevant External Links for SNORA63C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORA63C

No disorders were found for SNORA63C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA63C Gene

Publications for SNORA63C Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 60

Products for SNORA63C Gene

Sources for SNORA63C Gene

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