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Aliases for SNORA6 Gene

Subcategory (RNA class) for SNORA6 Gene


Quality Score for this RNA gene is


Aliases for SNORA6 Gene

  • Small Nucleolar RNA, H/ACA Box 6 2 3 5
  • ACA6 Small Nucleolar RNA 3
  • Small Nucleolar RNA M2 3
  • ACA6 SnoRNA 3
  • ACA6 3

External Ids for SNORA6 Gene

Previous GeneCards Identifiers for SNORA6 Gene

  • GC03P039429
  • GC03P039431
  • GC03P039449
  • GC03P039434
  • GC03P039438
  • GC03P039444

Summaries for SNORA6 Gene

GeneCards Summary for SNORA6 Gene

SNORA6 (Small Nucleolar RNA, H/ACA Box 6) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Alpha6-Beta4 Integrin Signaling Pathway and Viral mRNA Translation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA6 Gene

Genomics for SNORA6 Gene

Regulatory Elements for SNORA6 Gene

Enhancers for SNORA6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around SNORA6 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORA6 Gene

39,408,389 bp from pter
39,408,539 bp from pter
151 bases
Plus strand

Genomic View for SNORA6 Gene

Genes around SNORA6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA6 Gene

Proteins for SNORA6 Gene

Post-translational modifications for SNORA6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA6 Gene

Domains & Families for SNORA6 Gene

Gene Families for SNORA6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA6 Gene

Function for SNORA6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA6 Gene

Localization for SNORA6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORA6 Gene

Pathways & Interactions for SNORA6 Gene

genes like me logo Genes that share pathways with SNORA6: view

Pathways by source for SNORA6 Gene

Interacting Proteins for SNORA6 Gene

Gene Ontology (GO) - Biological Process for SNORA6 Gene


No data available for SIGNOR curated interactions for SNORA6 Gene

Drugs & Compounds for SNORA6 Gene

No Compound Related Data Available

Transcripts for SNORA6 Gene

mRNA/cDNA for SNORA6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA6 Gene

No ASD Table

Relevant External Links for SNORA6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA6 Gene

mRNA expression in normal human tissues for SNORA6 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA6 Gene:


SOURCE GeneReport for Unigene cluster for SNORA6 Gene:

genes like me logo Genes that share expression patterns with SNORA6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORA6 Gene

Orthologs for SNORA6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA6 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SNORA62 35
  • 93 (a)
(Canis familiaris)
Mammalia SNORA62 35
  • 89 (a)
(Monodelphis domestica)
Mammalia SNORA62 35
  • 83 (a)
(Mus musculus)
Mammalia Gm24044 35
  • 88 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA62 35
  • 81 (a)
(Pan troglodytes)
Mammalia SNORA62 35
  • 99 (a)
(Gallus gallus)
Aves SNORA62 35
  • 70 (a)
(Anolis carolinensis)
Reptilia SNORA62 35
  • 83 (a)
(Danio rerio)
Actinopterygii SNORA62 35
  • 68 (a)
Species where no ortholog for SNORA6 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA6 Gene

Gene Tree for SNORA6 (if available)
Gene Tree for SNORA6 (if available)

Paralogs for SNORA6 Gene

No data available for Paralogs for SNORA6 Gene

Variants for SNORA6 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA6 Gene

Variant ID Type Subtype PubMed ID
nsv509822 OTHER sequence alteration 20534489

Relevant External Links for SNORA6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORA6 Gene

Disorders for SNORA6 Gene

Relevant External Links for SNORA6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORA6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA6 Gene

Publications for SNORA6 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3 65
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3 65
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 65
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 65

Products for SNORA6 Gene

Sources for SNORA6 Gene

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