Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORA59A Gene

Subcategory (RNA class) for SNORA59A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORA59A Gene

  • Small Nucleolar RNA, H/ACA Box 59A 2 3
  • ACA59 3

External Ids for SNORA59A Gene

Summaries for SNORA59A Gene

GeneCards Summary for SNORA59A Gene

SNORA59A (Small Nucleolar RNA, H/ACA Box 59A) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA59A Gene

Genomics for SNORA59A Gene

Genomic Location for SNORA59A Gene

Start:
12,507,246 bp from pter
End:
12,507,397 bp from pter
Size:
152 bases
Orientation:
Plus strand

Genomic View for SNORA59A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORA59A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA59A Gene

Regulatory Elements for SNORA59A Gene

Proteins for SNORA59A Gene

Post-translational modifications for SNORA59A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA59A Gene

Domains for SNORA59A Gene

Gene Families for SNORA59A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORA59A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORA59A Gene

Function for SNORA59A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORA59A Gene

Localization for SNORA59A Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORA59A Gene

Pathways for SNORA59A Gene

SuperPathways for SNORA59A Gene

No Data Available

Interacting Proteins for SNORA59A Gene

Gene Ontology (GO) - Biological Process for SNORA59A Gene

None

No data available for Pathways by source for SNORA59A Gene

Transcripts for SNORA59A Gene

mRNA/cDNA for SNORA59A Gene

(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNORA59A Gene

Small nucleolar RNA, H/ACA box 59A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA59A Gene

No ASD Table

Relevant External Links for SNORA59A Gene

GeneLoc Exon Structure for
SNORA59A
ECgene alternative splicing isoforms for
SNORA59A

Expression for SNORA59A Gene

mRNA expression in normal human tissues for SNORA59A Gene

SOURCE GeneReport for Unigene cluster for SNORA59A Gene Hs.658450

genes like me logo Genes that share expressions with SNORA59A: view

Orthologs for SNORA59A Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA59A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ACA59 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ACA59 37
  • 57 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ACA59 37
  • 62 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia ACA59 37
  • 49 (a)
OneToMany
ACA59 37
  • 58 (a)
OneToMany
ACA59 37
  • 57 (a)
OneToMany
ACA59 37
  • 62 (a)
OneToMany
Species with no ortholog for SNORA59A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORA59A Gene

ENSEMBL:
Gene Tree for SNORA59A (if available)
TreeFam:
Gene Tree for SNORA59A (if available)

Paralogs for SNORA59A Gene

No data available for Paralogs for SNORA59A Gene

Variants for SNORA59A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA59A Gene

Variant ID Type Subtype PubMed ID
nsv517848 CNV Gain 19592680
nsv428337 CNV Loss 18775914

Relevant External Links for SNORA59A Gene

HapMap Linkage Disequilibrium report
SNORA59A

No data available for Sequence variations from dbSNP and Humsavar for SNORA59A Gene

Disorders for SNORA59A Gene

No disorders were found for SNORA59A Gene.

No data available for UniProtKB/Swiss-Prot for SNORA59A Gene

Publications for SNORA59A Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 2 3
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L. … Weber M.J. (Nucleic Acids Res. 2006) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  4. Lineage-specific gene duplication and loss in human and great ape evolution. (PMID: 15252450) Fortna A. … Sikela J.M. (PLoS Biol. 2004) 3

Products for SNORA59A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORA59A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORA59A
    • Block miRNA regulation of SNORA59A using miScript Target Protectors

    Sources for SNORA59A Gene

    Back to Top

    Content